KEGG T00192: DP2797

Desulfotalea psychrophila: DP2797

Entry

DP2797            CDS       T00192

Name

(GenBank) related to ribonuclease D

K03684

ribonuclease D [EC:3.1.13.5]

Organism

dps Desulfotalea psychrophila

Brite

KEGG Orthology (KO) [BR:dps00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dps03016]
    DP2797
Enzymes [BR:dps01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     DP2797
Transfer RNA biogenesis [BR:dps03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DP2797

SSDB

Motif

Pfam:

DNA_pol_A_exo1 HRDC

Other DBs

NCBI-ProteinID:

CAG37526

UniProt:

Q6AJF4

Position

3157211..3158335

AA seq 374 aa
MKQENIISTTEDLKKIVNKALKLDAVGLDTEFVWERTYYPQLGLIQIALSDEECYAIDPL
SIKDLSPLGELLADRNTIKILHDAPQDLIIMSQATGATPQNIFDTRLAAGFAGSISTISL
LQLVSEQLETELDKSETRTNWLKRPLTEKQLSYSLNDVRYLRATRVILLSKIIGPKIKSW
LQEELNLLNNPANYSTIADESRYKKVKGVNKLDRKSIGVAQEIATWREQKARELNRPRGH
VIKDDILLEIAAIRPTRPEELANTAISTKAAERYGNDICQATARALNKKEVDLPHQQKRS
QLSSQEKGALAQLKELITLKCDILGIDPALLGNSNELKKIIQTLYKGKTTHMRQSFGWRK
EFLKDFYQIHRDTI

NT seq 1125 nt +upstreamnt +downstreamnt
atgaagcaagaaaatattatttccactactgaagatctcaaaaaaatagtaaacaaggcc
cttaagctcgatgccgtaggtctcgataccgaatttgtctgggagagaacatactacccg
caactaggcctgatccagatagccctctccgacgaagaatgttatgccatcgaccctcta
tccataaaagacctcagcccactaggagagcttttggcagatagaaacaccattaaaata
ttacacgatgcgcctcaggacttaataatcatgagccaggcaacgggggcgacaccacaa
aatatttttgacacaagacttgcggcaggatttgccggttccatctcaaccatatcatta
ctccagctagtcagcgaacaacttgaaacagaactcgataaaagcgagacccgaacaaac
tggctgaaaagacctctcacagaaaagcagctcagctactcgctcaacgacgtacgctac
ctacgggcaacacgagtaattctcctcagcaaaatcattggccccaagatcaaatcctgg
ctccaagaagagctcaatctactaaataacccagctaactacagcaccatagccgacgaa
agccgctacaagaaagtaaagggcgtcaacaagctagacagaaaatccataggcgttgcc
caagagattgccacctggcgagaacagaaagcacgggaacttaaccggccaaggggccat
gtaatcaaagacgacatcctgcttgagatcgcagcaataagaccaacacgcccagaagaa
cttgccaacacggcaatcagcaccaaagcagcagagagatatggcaacgatatatgccag
gcaacagccagagctcttaataagaaagaggtcgaccttccgcaccaacagaagagaagc
caactctcctcccaggaaaaaggtgctctggcacagctcaaagagcttatcacccttaaa
tgcgacattctgggcatcgacccggctctacttggtaacagtaacgaactgaaaaaaatc
atccagacactttataagggcaagactacccatatgagacaatcctttggttggcgaaaa
gaattccttaaagatttctatcaaattcacagagacaccatctaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (48)   

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