KEGG   Dermatophagoides pteronyssinus (European house dust mite): 113788666
Entry
113788666         CDS       T05775                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit rpb1-like
  KO
K03006  DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
Organism
dpte  Dermatophagoides pteronyssinus (European house dust mite)
Pathway
dpte03020  RNA polymerase
dpte03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpte00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113788666
  09124 Replication and repair
   03420 Nucleotide excision repair
    113788666
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpte03021]
    113788666
   03400 DNA repair and recombination proteins [BR:dpte03400]
    113788666
Enzymes [BR:dpte01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     113788666
Transcription machinery [BR:dpte03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     113788666
DNA repair and recombination proteins [BR:dpte03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113788666
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RNA_pol_Rpb1_6 RNA_pol_Rpb1_7 CTD8 YppF
Other DBs
NCBI-GeneID: 113788666
NCBI-ProteinID: XP_027193932
UniProt: A0A6P6XKK8
Position
Unknown
AA seq 1421 aa
MSYRVCCGHFGHIELKKPVLNYAFIKTVVNVLRCVCVSCARILAHPSDKRFRDVLLIKSK
PARLTAIANITRTVTTCPIYEDDNGNVIGCGASQPTFKRDNLEILADFSRSGGQEGKGGI
KTSVEKYFSTTEILSVFKKIRTTDIKLLGFDGVNTSPENLIIRNLIVMPPCVRPPVQFGA
DRCEDDLTAKYNDILLLNKQIKRFEEAGAASHVMTSSYSLLQYHVATLMNNEISGIPVAT
TRRKKPIKGIRERLKGKNGRLRGNLMGKRVDFSARTVITGDPNLDLDQVGVPYSIAMNLT
FPEIVINSNLDEMRMAVTNGPYKWPGAKYVIRKDGTRYDLRHCYNGSSDLQLEPGCVVER
HLRDGDYVLFNRQPSLHKMSIMGHRVKVLPYSSFRINLSVTSPYNADFDGDEMNMHVPQS
YETRAEIKYLCAVPYQTISPQSNKPVMGIVQDTLIGVTLMSDKNIFVTKKELMSLCLQVE
GWSGEIFPPTVWKPQKLWTGKQLFTLCLLSNNNIRIRSENPNFTSNDGHVIIEDGELLSG
VIDKKIVGATSGGLIHVLWHQCGVITTRNFIHILQRVVTAWMLTQGFTVGISDIIVADET
AKKISEVLQARQEAVKELFKKACSGNFETQPGKGLLRSFEAVSNSEFNSAREIAGKYATD
FLSNSNNIYRMVMSGSKGSMINISQIMACVGQQNVEGKRIPFGFNARTLPHFAKFDFNAD
SRGFVKNSYLSGLLPHELFFHAMGGREGIIDTACKTSETGYIQRRLVKAMEDVAVAYDGT
VRNSNNEIIQFFYGEDGIRGEFIEQQDLILMTMNYEKLKKRFFHDIYDENYGKGWLEPSI
AQEIISRVHTEILDREYQFLLDSQRMLQTEIFPDGEYKQYLPVKFERFINIAKKKFLQET
ICTVDPRDLVRQIDQLVDDLQPVRYADNIVLESVRCSMVLFVIQLRTYLNSLELLRYHKF
SQEALTWIFDSIKNTYRTSLIQAGEVVGCLAAQSIGEPATQMTLNTFHFAGVGAKNVTLG
IPRLRELLNVAINIATPSLTVYLDSETAKNSEFVRKLQGEIEFTTLEKFIKKIELVFDPE
IMSSCIPEDNEWVEDYYSLNEMNESSASSMSVWVLRLTLQQRLITEGLRLSEIGEKIKKL
LAHLQMSVIWTDDNSDQFIIRIRASKNSAKLLDLHSTLNTAEVGSEETIDLLTYLMETTL
PSIRLRGIPGIKKVYIREERAVKYNPDKGVYEPCNGGWILDTDGVNLASVFTLEHVDFTR
TISNNISEVLKILGIEAARAALLKEIRQVISFDGSYVNYRHLAILCDVMTHRGTLVPINR
HGINRVNKGLFAKSSFEETVEIFSDAAMFGEMDTLNGLTENIIFGQLANFGTGMSDIMID
YAKLKNANTYFESYSGAEWAKLNNTVENNDISKLRFKLFGL
NT seq 4266 nt   +upstreamnt  +downstreamnt
atgtcatatcgagtttgttgtggtcactttggccacatcgaattaaaaaaacctgtgtta
aattatgcttttataaaaactgtggttaacgtcctccgctgtgtttgtgtttcttgcgca
agaattctagcacatcccagtgacaagagattcagagatgtcttgctaataaaatctaaa
cctgctcgtttgactgcaattgcaaatatcactaggactgttactacttgtcccatttat
gaagatgacaacggtaatgttattggttgcggagctagtcaaccaacgtttaaaagagac
aacttagaaattttagctgacttttcgcggtctggcggccaagaaggcaagggaggaatt
aagacatcagtagagaaatacttttctaccactgagatattgtctgtatttaaaaaaata
agaaccaccgatataaagcttctcggttttgacggtgttaacacatcccctgaaaattta
ataattaggaatctaattgtaatgccgccctgtgttcgtccacctgttcaattcggagca
gatcgttgtgaagatgatttaacagcaaaatacaacgacattttacttttaaacaagcaa
attaaaagatttgaggaagcaggagcagcttcacacgtaatgaccagcagttatagttta
ctgcaataccacgttgcaactttaatgaataatgaaatctctggtattcctgtcgcgact
acccgtagaaaaaagcctatcaaaggtattagagaacgattaaaaggaaaaaatgggcgt
ctcagaggtaatttaatgggtaagcgtgtagattttagtgcgagaactgttatcactggt
gaccctaacttggatttggatcaggttggtgttccttatagtattgcaatgaatcttaca
ttccctgaaatagtgatcaattcaaatcttgatgaaatgcgaatggctgttacaaatggt
ccgtacaaatggccaggtgctaaatacgttataagaaaagatggtactagatatgacctg
cgtcactgttacaatggctcctctgatttgcagctcgaacctggatgcgtcgtcgaacgt
cacttgagagacggtgattatgtattgttcaatcgtcaaccttctttgcacaagatgagt
atcatgggtcacagagttaaggtattaccgtactctagtttcagaatcaatcttagtgta
acctctccgtataatgccgatttcgatggagatgaaatgaatatgcatgttccacaatct
tacgaaactagagcagaaattaaatatttgtgtgctgttccctaccaaactatatctcct
caaagtaacaaacctgtaatggggattgttcaagatacactgattggagtcactttgatg
tctgataaaaacatttttgttactaaaaaagaattaatgtctttatgtttgcaagtggaa
ggatggtctggagaaatttttcctcctacggtttggaaaccacaaaaactttggacaggt
aaacagttgttcacgctttgtttgctttcaaataataacattcgaattcgatctgaaaat
cctaacttcacgtccaacgatggtcatgttataattgaggacggtgagctgctttccgga
gttattgataaaaaaattgtaggagctacttctggtggtttaattcatgtgctatggcat
cagtgcggtgtcattacgacaagaaacttcattcatattttgcaacgtgtcgttactgcg
tggatgctcacccaaggtttcaccgtcggcatcagtgatattattgtggcagatgaaacg
gcaaagaagatttcagaagttttacaagctagacaggaggcggtgaaagagcttttcaaa
aaagcttgttctggtaatttcgagacgcaaccaggcaaaggcctgttgcgttctttcgaa
gccgtgtcgaacagcgaattcaattcagctagagaaattgcaggaaaatacgccaccgat
ttcctatctaactcaaacaacatttatagaatggttatgtctggttccaagggtagtatg
attaacatatcgcaaatcatggcttgtgtcggtcaacaaaatgtagaaggtaaaagaatc
ccatttggattcaacgctagaactttacctcatttcgccaaattcgactttaacgctgat
agcagaggttttgttaagaattcatatttaagtggtttgttaccacatgagttgtttttt
cacgccatgggtggaagagaaggaatcattgatacagcctgtaaaacatctgaaaccggt
tacatacaacgacgtttagtaaaggctatggaagatgttgctgtggcatatgatggaact
gttagaaattctaacaatgaaattattcagttcttttacggtgaagatggaatcagaggt
gagtttattgagcaacaagacttgatactaatgacaatgaattatgaaaaactgaaaaaa
cgattctttcacgatatttatgatgaaaactacggaaaaggctggttagaaccttctatc
gctcaagagattataagccgagttcatactgaaattttagatcgagaatatcagttttta
ttagattcacagagaatgcttcaaactgaaattttccccgatggtgaatacaaacaatat
ttgcctgtcaagtttgaaagatttattaatattgcgaagaaaaaattccttcaagaaact
atttgtactgtagatcctcgcgacttggttcgtcaaatagaccaacttgtcgatgacttg
cagccagtacgctatgcagataatattgtattggagagcgttcgttgttccatggtgctt
ttcgttattcaactcagaacctatttaaacagtttggaattattgcgctaccataaattt
agtcaagaagctctgacatggatattcgattcaattaaaaatacgtacagaacctcattg
atacaggcaggagaggttgtcggttgtttggctgcgcagtctattggcgagccagcaacg
cagatgaccttaaatacattccacttcgccggagttggagcgaaaaatgttacattaggt
attcctcgactcagagaactattgaacgtcgcaattaatattgctactcctagtttgact
gtatatctagattccgaaacggctaaaaattcggagtttgttcgaaaattacaaggagaa
attgagtttactacacttgaaaagtttattaagaaaatagagttggtttttgacccagaa
attatgagcagttgcatacccgaagataatgaatgggtagaagattactattcgctaaac
gaaatgaacgaatcttccgctagcagcatgagcgtttgggttttgcggttaacattacag
caaagacttattacggaagggttacggttaagcgaaattggagaaaaaataaaaaaactt
ctagctcatttgcagatgtcagttatttggactgatgataacagtgatcaatttatcatc
agaataagagcttctaaaaactccgccaaactactcgatttacactctacgttaaataca
gcagaagtaggcagtgaagagacaattgatttgttaacctatttaatggaaacgactctg
ccttccatacgtttacgaggtataccgggaatcaaaaaagtatatattcgagaagaacga
gctgtgaaatataaccccgacaagggagtttatgaaccatgcaatggtggatggattctc
gatactgacggtgttaacctggccagtgtgtttacgcttgaacacgtagatttcacgcgc
acgataagtaacaacatttctgaagttctaaaaatactaggaattgaagctgcacgggct
gctttgctgaaggaaatccgtcaagtcatttctttcgatggttcatatgtcaactaccga
catctcgctattctatgtgacgttatgactcatagaggaaccttagtgcctattaataga
cacggtattaacagagtcaacaaaggattgtttgcaaagtcttcattcgaagaaactgtt
gaaatattctcagacgcagctatgtttggcgaaatggacacactgaatggactcactgaa
aatataattttcggtcagcttgcgaactttggtaccggtatgagcgatatcatgattgat
tacgccaagcttaaaaacgcaaacacatatttcgagtcttattctggtgctgaatgggct
aaattgaacaatactgtggagaacaacgatatttcgaagttacgttttaaactttttggt
ctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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