KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_303951
Entry
DAPPUDRAFT_303951 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
dpx  Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dpx03016]
    DAPPUDRAFT_303951
Enzymes [BR:dpx01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     DAPPUDRAFT_303951
Transfer RNA biogenesis [BR:dpx03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DAPPUDRAFT_303951
 Prokaryotic type
    DAPPUDRAFT_303951
SSDB
Motif
Pfam: TruD BET DUF1400
Other DBs
NCBI-ProteinID: EFX80692
JGI: Dappu1_303951
UniProt: E9GIP5
Position
Unknown
AA seq 742 aa
MAKRNKHRKASAASSKKENHQSIHHENVLGPVTEAQVGIQEYAKKGKQFSAHLKQCNSDF
QVHEISMDGKIVHLTDLSQLNPEQKKERLSVRRKSQDNAVPHVSSYTEFVLYMENQETVD
ANFVLAKIAKKNKIHSPEFMTACSTHEKGTITSQLVTANKNLDPTKMKCDLKSESKLAFG
NFTFTDKPVQQGSLKGNRFVIALRNVNGDKIQIDSNLKSVKEYGFINYYGTECFGTRTHI
IGKQLLLNQWKEAIDLIAEVFKGHEHFHSMETQLLSYMENHGGDLVGALNTIPFEIRLSY
IHAYQSFIWNSIVSKRIAEFGVKPILGDLVYARSVDELQEMDNNDSNSSNQSECSNPTIV
SIDKNNILNYTIGDVVLPLPGYDVTYPDNEVADWYKDLLLADGLSEVDFERSAKNHSLSG
AYRHLILKPTDFNWRFLWYSNPTERLILSDLDRLEKTQFLHTAVTEEQTDQEKRITRSGQ
LKQKNSPMPKTPEPVKKEPVLSPSGDCDNDAKPMSYDEKLQLISNIRVLPGKKLGRVVHI
FRSLEPELAGWDPDEVVLDLEALQPLTLRSLETYVESCLSPKPLKTYGKKQSDIKMEETL
ELKENFTPKKVHRKTNVKDAECLVSQVGSGIGLSSNASALTDLETGDDIDFLGLILEFNL
PPSSYASMVVREIMKVDNSAVLGKQNDPIQHSSQATLKSSDSEGSRKKKPRIHETVDVGE
ITSSSEASTTTRGKRLKLCDLS
NT seq 2229 nt   +upstreamnt  +downstreamnt
atggcaaaacgaaacaaacatagaaaggcttcagctgcttcttcaaagaaagaaaaccat
cagtcaatccatcatgaaaatgtactaggcccagtgacggaagctcaagttggtatacaa
gaatacgccaaaaaaggaaaacagttttcagctcatttgaagcaatgtaattcagatttc
caggttcatgaaattagcatggatgggaaaattgtccatttaacagatctcagtcagctg
aaccctgaacagaaaaaagaaagactttcagtgagaagaaagtcccaagataatgcagtg
ccacatgtatcttcttacactgaatttgtattgtacatggaaaatcaagaaacagttgat
gcaaattttgtacttgccaaaatcgccaagaaaaataagatacattcaccggaattcatg
actgcctgttcaacacatgaaaaaggaacaatcactagtcagctcgtaactgctaataag
aatttagatccaacgaaaatgaaatgcgatttgaaatcagagtccaagttagctttcgga
aattttacctttaccgacaaaccagtccaacaaggaagtctgaagggtaatcgtttcgtc
attgcattgaggaatgttaacggtgataagattcaaatcgattcgaatctcaagtcagtg
aaagaatacggttttatcaattattatggaactgaatgttttggaacaaggactcacata
attggcaaacaactattgttaaaccagtggaaagaagctatcgatttgattgcagaggta
ttcaaggggcatgagcacttccactcaatggaaacccagctcttatcttacatggagaat
catggtggagatctcgttggcgctttgaatactatcccctttgaaatacggctttcttat
attcacgcctatcaaagtttcatctggaacagtatcgtttctaagcgtattgcagaattt
ggtgtaaagccgattctaggcgatttagtttatgctcgaagcgttgacgaacttcaagaa
atggacaataatgacagcaattccagtaaccaatcggaatgcagtaatccaacaatcgtg
tccatcgacaaaaacaacatcctgaactacacaataggcgatgttgtgttaccgcttccg
ggttacgatgtaacttatccggacaacgaggttgccgattggtataaagatcttctccta
gcggatgggctgtcggaggtggatttcgaaagaagcgccaaaaatcatagcctttctgga
gcgtaccgtcacctgattttgaagcctaccgatttcaactggagatttttatggtacagt
aatccaacggagaggctcatattatctgatttggatcgactggaaaagactcagttccta
cacacggcagtgacagaggagcaaacggaccaggaaaagaggattactaggagtggtcaa
ctaaaacaaaagaattccccaatgccaaaaaccccagagccagttaagaaggaacccgtt
ctttctccttcaggtgattgcgataacgacgccaaaccaatgtcgtacgacgaaaaatta
caattgatttctaacatccgagtgcttccaggtaaaaagcttggccgagtagtccatatt
ttccgttcacttgagccagagttagctggttgggatcctgatgaagttgtactagatttg
gaagcccttcaaccgctgactctccgatcacttgaaacatacgtggaatcttgtctaagc
ccgaagcctcttaaaacatacggaaaaaagcaatcggatataaagatggaagagacattg
gagctaaaggaaaattttacacccaagaaggttcatcgcaaaacaaatgtcaaagacgct
gaatgccttgttagtcaagttggttccggcattggattgagttctaatgcttcagctctc
acggatttggaaacgggtgatgatattgattttctcggtcttattctcgaattcaaccta
ccgccgtcatcttacgcctccatggtcgttagagaaatcatgaaggtagacaacagtgca
gtgttggggaaacaaaacgatcccatccaacattcttcacaagcaacgttgaagtcctca
gactccgagggatcccggaagaagaagcctagaattcacgaaactgtcgacgtcggcgag
atcacatcatcaagcgaagcatcgacgacgacccggggaaagcgattgaagctgtgcgat
ttaagttga

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