KEGG   Danio rerio (zebrafish): 100003587
Entry
100003587         CDS       T01004                                 
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
  KO
K10614  E3 ubiquitin-protein ligase HERC3 [EC:2.3.2.26]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100003587 (herc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    100003587 (herc3)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     100003587 (herc3)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  HECT type E3
   100003587 (herc3)
SSDB
Motif
Pfam: RCC1 HECT RCC1_2
Other DBs
NCBI-GeneID: 100003587
NCBI-ProteinID: NP_001139096
ZFIN: ZDB-GENE-090313-139
Ensembl: ENSDARG00000075887
UniProt: B8JLD4
Position
1:50639416..50691538
AA seq 1046 aa
MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS
NSCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT
AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCT
IAKIHSGGDHNFLLLSTVEGLSCPDDFRILNTTKSIALINSESLDSWRMKLHDNSDSSIT
NDIILLLSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLEQIT
KSFESLLIPQLPCSPPDVEAMRIYLILSECPAFQDSKNYITLTIPLAMAILRLDANPSKV
LDNWWSLMDCTVFTRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLK
AHRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKT
TVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNHLVSDALRELTIYN
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMNPIYGMFTQYSESNLLWFSDKCFV
EHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLEISPTLDDLKELSPTEGRSLQQLLE
FEGDVEETFCLNFAITREYYGITEVKELVQGGKTIAVDKTNRKEFVQAYLQYVFSDAVQE
QYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSATHPTVKM
FWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDM
PCYQTKETLRQRLTQAVEQYEGFSLV
NT seq 3141 nt   +upstreamnt  +downstreamnt
atgatgctgtgctggggaagcagtggcgcgggtcagctaggcatcggtgcgtcagaggcg
tcagtctttgagcctaggagctgctgcgtgttcgacggccgagggcttaaagaagtggcg
tgcggcaaccagcactcgctcttcctgttgcatgatggaagcgtctacacctgcggatcc
aacagctgcggtcagctgggccacgacaagggaggaagcaggccagagttggttggcgct
ctggacgctcagaagatctccggcgtgtcatgtggtcaggctcactctctggcggtgaac
gagcagggtcaggtgtttgcgtggggagctggagacggagggcagcttggtctgggaaca
gctgaagaggcggtccgcgtgcctcggttgattaaaaagttgtgcgagcatcggatctct
caagtaatgtgtggaaaccatcactgtatagctctttcaaaagatggtcagttgttcgta
tggggagagaactcgagcggtcagctgggtttagggaagggagagccgagcactctgtct
cctcagccgctcaaatctctgtgtgggatcccactgacccagatcagcgccggaggagac
cacagcttcgccctgtccttctctggagctgtgttcgggtggggcaagaacagcgctggg
cagttgggtctcaatgacgagcaagaccgagctgttccctgccacatcaagttcctgcgc
tcacagaaggtggtttacatcagctgtggagaggagcacacggctgccctgacaaaggaa
gggggtctgttcacatttggaaatggttcaaaaggacagctgggccatgactccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcactgaggtgtctcagatcgct
tgtgggcggaaccacacccttgcattcgtgccctccaccggtctgatatatgcttttggc
tgcaacactcagggccagctcggtacaggcataagaggaagcgccaagagccccgttcct
gtcagtaacatccagcccctttgcattggaaatgcatacacaagaacagagcactgcacc
attgcgaagattcacagtggaggagatcataatttcctgttgttgtcgactgtggagggt
ttgtcttgtcctgatgatttccgcattctgaacaccaccaaaagcatcgctctgattaat
tctgagagtctggacagctggaggatgaagcttcatgacaacagcgattccagcatcact
aatgacatcattctgctgttgtcctcgactgcatgttggaatgccagctttttggaccaa
agtgatgacgggcatttcaaaaccaaccccaaagtcccaggcatcgatttcaatgctgtt
cggctgcttttcgagaccctgatgaaaccagccttcgctagacttttggagcagatcaca
aagagctttgagagtctcctgatcccccagctgccctgttctcctcctgacgtggaagcc
atgcggatctacctgatcctgtctgaatgtcccgctttccaggactccaaaaactacatc
actctcaccatccctctcgccatggccatcctcagactggacgccaacccaagcaaagtg
ctcgataactggtggtcgctgatggactgcacggtgtttaccagattagtggagatgtac
aaaagcatcgttgtgtttctgttgaccggcgggaaagctcttctgatgcctgtgtttctg
gagagctacaccagcgccgctttgcgactgctggagaaactacacaaggtcaacctgaaa
gcccatcgtgtggaatacaaccacttttacatccccgacatcgcaaccctggtggacatc
caggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccctcca
gtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaagaca
accgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagtggtgctaacttg
cacaacgtcttcatgctgttgaccatggagcctttgctggcgagaaaccctttcctggtg
ctccacgtacggagaaaccacttagtcagcgacgctctccgggagctcacgatctacaat
gatgtagacttgaaaaagccactcaaggtcatctttgatggagaggaagctgtggatgct
ggaggagtcaccaaggagttcttcctgctgctgctgaaagagctgatgaaccccatctac
ggcatgttcacgcagtattcagaatccaatctgctgtggttctctgacaaatgttttgtg
gagcacaattggttccacttgattggcataatctgtggtttggccatctataactccact
gtggtggacctgcactttcccctggtgctctacaagaagctcctggaaatttcgcccact
ctggatgacctgaaagaactttcgcctacagagggaaggagtttgcagcagctgctggag
tttgagggtgatgtggaggaaaccttctgtctcaactttgccatcacgagagagtattat
gggatcacggaggtgaaggagctggtgcagggaggaaaaaccatcgctgtggacaaaacc
aacaggaaggagtttgttcaggcgtatctgcagtatgtgttcagcgacgcagtacaggag
cagtattcggccttctccagtggtttcctgaaggtctgcggtggggagattctgtctctc
ttccagccctctgaactcatggccatggtggtgggcaacaacaactacaactgggaggag
atggagaagaatgcctcatacaagggcgagttttctgcaacccacccaacagtaaagatg
ttttgggaagtgtttcatgagttttccttggagaaaaaaaagcagttcttattgttcttg
acaggcagtgaccgcatccccatccacggcatggccagtttgcgcattgtcatccagtcc
acggctgcagaagagcactaccttccagtggctcacacctgttataatatgctggacatg
ccctgctaccagaccaaagagaccctgcggcagcgcctcacacaggccgtggagcagtac
gagggcttcagtctggtctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (45)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (57)   

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