KEGG   Danio rerio (zebrafish): 100334297
Entry
100334297         CDS       T01004                                 
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like isoform X2
  KO
K04954  hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    100334297
Ion channels [BR:dre04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (HCN)
   100334297
SSDB
Motif
Pfam: Ion_trans Ion_trans_N cNMP_binding Ion_trans_2
Other DBs
NCBI-GeneID: 100334297
NCBI-ProteinID: XP_005169491
Ensembl: ENSDARG00000104480
UniProt: A0A8M2BGT7
Position
21:complement(10251716..10446886)
AA seq 654 aa
MEDKSNSFSSNKEEKADGNNVFQRQDSILKNSMGSQNMKDHGNSVGGKGDREEAMVGFDD
IDAASRQYGFMQRQFGAMMQPGVNKFSLRMFGSQKAVEKEQERVQTAGYWIIHPYSDFRF
YWDLIMLIMMMGNLIIIPVGITFFSEQTTTSWLVFNVASDTIFLVDLVMNFRTGIVNEES
SEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKIL
SLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPLLQ
DFPPDCWVSLNGMVNDSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVGA
TCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGKI
FDEDSILNELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYII
REGTVGKKMYFIQHGVASVITKFNKELKLTDGSYFGEICLLTKGRRTASVRADTYCRLFS
LSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGAPLEMSSSRFQECPGRPVSSREEELAPA
PEIPEGSERWRLQHSRERAAEADHPAGPRDGDDGGSEAVSHGDELHADVWKLHH
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggaagacaaatccaattcgttctcgagcaacaaagaggagaaagcggatgggaataat
gtgttccagaggcaagactcgatcctgaagaacagcatggggagtcagaacatgaaagac
cacggcaactcagtgggtggcaagggggaccgggaagaagccatggtcggctttgacgat
atagacgccgcgtccaggcaatacgggtttatgcagcggcaatttggagccatgatgcag
cccggggtgaataagttctccttgcggatgttcggcagtcagaaagccgtggagaaagag
caggagagggtgcagacggctggatattggatcattcacccctatagtgattttaggttc
tactgggacttgataatgctcatcatgatgatggggaatctaattatcattcctgtggga
attaccttcttttccgagcaaaccaccaccagctggctcgtcttcaacgtggcgtcggac
accatcttcctggtggacctggtcatgaacttccgaacgggaattgtcaatgaggaaagc
tcggagatcatcctggacccaaaggtcattaagatgaactacctgaaaagttggttcgtg
gtagacttcctgtcctccatcccggtggattatatctttctaatagtggagaaaggcttc
gactcagaggtctacaagacggcccgagcgctgcgcatcgtacgcttcaccaaaatcctc
agcttgctccgtcttctcaggctttcacgcctcatcagatacatccaccagtgggaggag
atctttcatatgacgtatgacctggcgagtgcggtggtaagaatctttaatctgattggc
atgatgctgctgctctgtcactgggacggatgcctgcagttcctggtgccgctcctgcaa
gacttccctcccgattgctgggtgtcgctaaacggtatggttaacgactcgtgggggaag
cagtactcatacgccctgttcaaggccatgagccacatgttgtgtatcgggtatggagcc
cgagcgcctgttagcatgtccgacctctggatcaccatgctcagtatgatcgttggcgcc
acctgctatgccatgttcgtgggtcacgccacagccctcatccagtctctggactcgtcc
cgacgacagtaccaggagaagtacaagcaagtggagcagtacatgtccttccacaagctg
cctgccgacatgcgtcagaaaatccacgattattatgaacatcgttaccaggggaagata
tttgatgaagacagcatccttaacgagctcaacgacccgctcaaagaggaaattgtgaac
ttcaattgccgtaagctggtggccacgatgcctctgtttgcgaacgcggacccaaacttt
gtgacaggaatgttgagcaaactgaagtttgaggtcttccagcccaacgattacattatt
cgtgagggaaccgtggggaaaaagatgtacttcatacagcacggagtggccagtgtcatt
accaaattcaacaaagagctcaaactcactgacggatcctactttggagagatctgtctg
ctgacgaaaggacgccgtacagctagcgtccgtgcggacacctactgccggcttttctct
ctatctgttgaccatttcaatgaagtcctggaggagtatcccatgatgcgccgtgctttc
gagactgtggctattgaccgcttggaccgcatcggagcccctcttgagatgagctcatct
cgttttcaagagtgtcctggccgacccgtaagcagcagggaagaagaactcgctcctgct
ccagaaattccagaaggatctgaacgctggcgtcttcaacactcaagagaacgagctgct
gaagcagatcatccggcaggaccgagagatggtgatgatggtggatcggaagcagtcagt
cacggggatgaactccacgccgatgtctggaaactccatcattaa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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