KEGG   Danio rerio (zebrafish): 101884332
Entry
101884332         CDS       T01004                                 
Symbol
rfx5
Name
(RefSeq) DNA-binding protein RFX5
  KO
K08061  regulatory factor X 5
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    101884332 (rfx5)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Other basic domains
   RF-X
    101884332 (rfx5)
SSDB
Motif
Pfam: RFX_DNA_binding RFX5_N Pox_D5
Other DBs
NCBI-GeneID: 101884332
NCBI-ProteinID: XP_005159531
ZFIN: ZDB-GENE-070717-3
Ensembl: ENSDARG00000063258
UniProt: A0A8M2B678
Position
19:complement(7481864..7495245)
AA seq 590 aa
MAEDQLKADSSAGEGETEPNTLLQKLKSNISKNVQGKVDKILEDVQRFSDNDKLYLYLQL
PSGPSAGEKSGDSNSVNTADQLHTCNWIRSHLEEHPDTCLPKQDVYETYRKHCDNLQHRP
LSAANFGKIIRDIFPNIKARRLGGRGQSKYCYSGIRRKTVLNMPLLPNLDLKNDPSELTE
LVQTYKQEVTEAACELICDWAQKILKRSFDTVVEIARFLVQEHIVNPRCSQAELVTSAAL
AGGPSKPHKVIKKIPAASRAGGAEEDGGSVENKQKEKDGVEQPPSNKQQVSEKPPNKVES
ARVEAYMKKLPQLLPRGTVPEKTSPPCLAPADSGSVQVTLPITVTTIPSQPGGTVPVMIL
PSGVSLSYPEREKTSVTVATSAAPTPVVQRARPAAPKRAPDPSTSVSASGVVLKRKRGRP
RKQRPEDLLSHLQSPSIPTPNPALLTRGVIQKAMPSCPPAAPSQLVEIVIQDQQSLMLSQ
LPTIQEVSDVEHRSVVVQCHPAPEAEKQQSVLLMQGPNQLNYEQGRRMVIQRAPLSSEGR
PAPIEVPQSAITYLPPATLLEDRGEVEITLTPVEPHDDSMLLKNSKPEDP
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggcagaagatcagttaaaggcagattcctcggctggggagggagagacggagcccaat
acactgctgcagaagctcaagagcaacatttctaaaaatgtgcaggggaaagtggacaaa
attttggaagatgtacagcgtttttctgacaacgataagctctacctttatctacagcta
ccctcaggtccaagtgcaggagaaaagagtggtgattcaaactcggtcaacacagcagac
caacttcacacctgcaactggatccgtagccatttggaagaacatcctgacacctgcctg
cctaaacaagatgtttacgagacataccggaagcactgtgacaacctacagcatcggcct
ctgagtgcagcgaattttggcaaaatcatacgagacatcttccctaacataaaagcacga
agactgggtggtagaggacagtccaaatactgctatagcgggatacgtcgaaaaactgtg
ctcaacatgccattactacccaacctggacctcaaaaatgacccgtctgaactgacagaa
ctggtgcaaacctacaagcaagaggtgaccgaagcagcctgcgagctcatttgtgattgg
gcgcagaagatcctgaagcgctctttcgacacggtggtagaaatcgcacgattcctcgtg
caagagcacatcgtcaacccccgctgcagccaagctgagctcgtcacctcagctgcactg
gcgggtggaccctcgaaacctcataaggtcatcaaaaagattcctgcagcttcccgagca
ggtggagcagaggaagatggcggcagtgtggaaaataagcaaaaagagaaagacggtgtg
gagcagccgccatccaataagcagcaagtcagtgaaaaaccacccaacaaggtggagtcg
gctcgagtggaggcctacatgaagaaactgccccagcttcttcccagaggcaccgtccca
gagaaaacctccccaccgtgtctcgcgccagccgattcgggcagcgttcaagtcactttg
cccataaccgtaactacaataccctcacagccaggcggaaccgtcccagttatgattctc
ccctcgggcgtaagtctgtcctaccccgaacgtgagaaaacatcagtcacggtcgccact
tctgcagccccgactccggtggttcaaagagcgcgaccggcggctcctaaaagggcacct
gacccctccacctcagtgtcagcctctggtgttgttctgaaacgcaaaagaggacgaccc
agaaaacaaagaccggaagatctattatcacatctacagtcgccttcaatcccaaccccc
aatccagctttgctcacaagaggcgtgattcaaaaggccatgccctcctgccctcctgcc
gctccttcacagctcgtcgaaatagtcatccaggaccagcagagtctgatgctcagccaa
cttccaaccatccaggaggtgtcagacgtggagcatcgaagcgtagtggtgcagtgtcac
cctgccccagaagcggagaagcagcagtccgtcctgctaatgcaagggccaaaccaactc
aattacgagcagggccggaggatggtcatccagcgcgcgccactctccagtgaaggaagg
cctgctcctattgaagtgccgcagtctgcaatcacgtacctcccgccggcaacattacta
gaagaccgaggagaagtcgaaatcactctgactcctgtggagccacacgacgattccatg
ctcctaaaaaactctaaaccagaggacccctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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