KEGG   Danio rerio (zebrafish): 108179221
Entry
108179221         CDS       T01004                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
  KO
K13116  ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    108179221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    108179221
Spliceosome [BR:dre03041]
 Complex C
  Other components
   Complex C specific factors
    108179221
SSDB
Motif
Pfam: DEAD Helicase_C ResIII zf-CCHC UTP25 Toprim
Other DBs
NCBI-GeneID: 108179221
NCBI-ProteinID: XP_017209912
UniProt: A0A4P2L339
Position
Unknown
AA seq 613 aa
METENRAKKRVYSEKSASEGSEDDDYVPYVPVKIRKQQMLQKVMRLRGKGLTEEEQKDSG
GEQKDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSV
KEMAKGITYEDPIKTSWNAPRYILSMPAVRHERVRKKYHILVEGEGIPAPIKSFREMKFP
QAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPIIMFCLEQEKR
LPFCKREGPYGLIICPSRELARQTHGIIEYYCKLLEDEGAPQMRCALCIGGMSVKEQMEV
VKHGVHMMVATPGRLMDLLNKKMVSLDICRYLALDEADRMIDMGFEEDIRTIFSYFKGQR
QTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYVKEEAKMVYLLECLQ
KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVAT
DVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDESVLMDLK
ALLVEAKQKVPPVLQVLHTGDETMLDIGGERGCTFCGGLGHRITDCPKLEAMQTKQVTNI
GRKDYLANSSMDF
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggaaacggaaaaccgagccaaaaagagagtgtactcggagaagtctgcttctgaggga
tcggaggatgatgactacgtgccgtatgttcctgtcaagatcagaaaacagcagatgctc
cagaaggtgatgcgtctgcggggtaaaggcctgacggaggaggagcagaaggacagtggt
ggagaacagaaggatgaggatgaaggtctgggtcctcgatctaatgtcagcctgctggac
caacatcagcacctcaaggagaaagcagaagctcgaaaggagtctgccaaggagaaacag
ctgaaggaggaggaaaagattctggagagtgtggctgaaggcagagccctgatgtctgtg
aaggaaatggccaaaggaatcacatatgaagatccaataaagacaagctggaatgctcct
cggtatatcctgagcatgccggcggtacgacatgagcgtgtgaggaagaaataccacatt
ctggtggagggagaaggcattcccgctcccatcaagagcttcagagagatgaagtttcct
caggccattctgaaaggactgaagaagaaggggatcgttcacccgacacccattcagatt
cagggaataccaaccattctctccggcagggacatgattggcattgcgttcacgggttcg
gggaaaacgctggtcttcactctgcccatcatcatgttctgcctggagcaggagaaacgc
ctgcctttctgtaagagagagggaccgtacgggctcatcatctgcccttctagggagctg
gcgagacaaacacacggcatcattgagtactactgtaagctgctggaggatgaaggagct
cctcagatgcgctgcgctctctgcattggaggaatgtctgtcaaagagcagatggaggtg
gtcaaacacggggtgcacatgatggtggcgactccaggccgactgatggacctgctgaac
aagaagatggtgagtctggacatctgcaggtatctggctctggatgaggctgacaggatg
atcgacatgggcttcgaggaggacatccggaccatcttctcttactttaagggtcagagg
caaacgctgctcttcagtgccacgatgcccaagaagatccagaactttgccaaaagtgct
ttagttaaacccatcactattaatgtgggccgagctggagccgccagtctggacgtcatt
caggaagtggagtacgtgaaagaagaggccaagatggtttatctgctggagtgtcttcag
aaaaccccaccgccggtattgatatttgcagagaagaaagcagatgtggatgcaatacac
gagtatctgctgctaaaaggtgtggaggccgtggccattcatggaggaaaagatcaggaa
gaaagaaccaaagccatcgaggccttcaaagagggaaagaaagatgttttagtggccaca
gacgtcgcttccaagggtctggatttcccagctatacagcatgtagtcaattatgacatg
ccggaggagatcgagaactacgtccacagaataggccgcacaggtcgatccggcaagact
ggaatcgccacaacatttatcaacaaaggatgtgatgagtctgtgctgatggatctgaag
gctctgctggttgaagctaagcagaaagttcctccggttctgcaggttctgcacaccgga
gacgagaccatgctggatattggaggggagcgcggctgtaccttctgcggaggtttgggt
cacaggatcacagattgtcccaaactggaggccatgcagaccaaacaggtcaccaacatc
ggccgcaaagactacctggccaacagctccatggacttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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