KEGG   Danio rerio (zebrafish): 140819
Entry
140819            CDS       T01004                                 
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa precursor
  KO
K05695  receptor-type tyrosine-protein phosphatase F [EC:3.1.3.48]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04514  Cell adhesion molecules
dre04520  Adherens junction
dre04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    140819 (ptprfa)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    140819 (ptprfa)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    140819 (ptprfa)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dre01009]
    140819 (ptprfa)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.48  protein-tyrosine-phosphatase
     140819 (ptprfa)
Protein phosphatases and associated proteins [BR:dre01009]
 Protein tyrosine phosphatases (PTPs)
  Class I PTPs (Classical)
   Receptor PTPs
    140819 (ptprfa)
SSDB
Motif
Pfam: Y_phosphatase fn3 I-set Ig_3 Pur_ac_phosph_N Ig_2 ig fn3_2 Interfer-bind DSPc V-set C2-set_2 Y_phosphatase3 PTPlike_phytase Insulin_TMD TMEM154
Other DBs
NCBI-GeneID: 140819
NCBI-ProteinID: NP_001298277
ZFIN: ZDB-GENE-020107-2
Ensembl: ENSDARG00000103479
UniProt: H9CWQ2
Position
6:2872081..3274493
AA seq 1894 aa
MVPQTRQGSARHGATSLLLLLLCLAVPIHADSMPSFVKTPEDQTGISGGVASFVCQAVGE
PKPRITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTS
AKLTVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDFLPVDINS
SNGRIKQLRSGALQIENSEESDQGKYECVAVNSAGTRYSAPANLYVRVRRVPPRFSIPPT
NHEVMPGGSVNLTCVAVGAPMPYVKWMKGEQELTKEEEMPIGRNVLELTNIRQSGNYTCV
AISSLGMIDTTAQITVKALPRPPASLIVTETTATSVTLTWDSGNPEPVSYYVIQYRSKIS
DNGFQEVDGVASTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSGMVETRTSEQAPSSPPLR
VQARMLSATTMLVQWEPPEEPNGQIRGYRVYYTSDLHFPLSTWQKHNTEDSSLTTISGLV
PDITYGLRVLAFTSVGDGPPSDILQVKTQQGVPAQPTGFEAEAELDTRIMLSWLWPVQDQ
ITKYELTYWEADSDNKHHVIFDPAGSYAIDSLKPDTLYKFSLAARSEMGLGVYTQPIEAR
TAQSAPSAPPQEVHLISLSSSSIKVSWVAPPAASRHGSIVRYSLAYQAVSGEDQERHEVK
DIPADVSSYVLEGLEKWTEYTVWVKAHTDVGPGPESGSTRIRTQEDVPGAPPRRVEVDNI
NSTALRVSWKPPLQQKQHGHIRGYQVVYSRLENGEPRGQPIILDVALPEAQEAVISGLLP
ETTYSVTVAAYTTKGDGARSKAKVVTTTGAVPGKPTMIISTTIGNTALIQWQPPKEMVGE
LMGYRLRYKREEEDIYTVRDFRRTDDHFTVTGLHKGATYIFKLCAKNRAGNGEEYSKEIS
TPEDVPSSYPQNLKVVGLTTTTTKLAWDPPPLPERNGKIVRYVVVYRDINSHQNQTNGTA
DTEMTIQGLKPDTTYDIRVRAFTGKGGGPISPSIQSRTMSTSMPEFTKNFGVKAVMKTSV
LLTWEVPETYKSQVPFKILYNQQSVEVQGDLKRKLITRLQPDTDYSFVLMSRGNSAGGLQ
QQVSIRTAPDLFTTKPAHQKLDPEEGGKLAITLPEVHNSALVRWFYIVVVPVTPSTLRHW
ENPEDIDLDELMGNNRDAAVRRRRRQTQDFLRPYIAAKLESLPERFVLGDEKTYSNYYNK
PLPGQQQYRTFILAALKDRDSTFTVSPFSEPMMVKLHSGMSRHVEDPEMLWVMGPVLAVV
LIIIIVIAILLFKRKRTSPSAKDEHSAGVKDHLLAHSSDPVEMRRLNYQTQGMREHPPVS
VCALADHIERLRANDSLRFSQEYESVDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVV
LTPVDGVPGSDYINGNYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTSTIVMMTRLE
EKSRVKCDQYWPSRGTETYGMIQVSMLDTVELATYSVRTFALYKNGSSEKREVRQFQFMA
WPDHGVPEYPTPILAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKS
VDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARSLYTHIQKLTQAPPG
DTVTAMELEFKKLANSKAHTSRFISASLPCNKFKNRLVNIMPFESSRVCLQPIRGVEGSD
YINASFIDGYRQQKAYIATQGPLSETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYW
PAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGE
GFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTIKT
LRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq 5685 nt   +upstreamnt  +downstreamnt
atggtgccacaaacccgacagggctccgctcgccacggtgccacgtccctactgctgctg
ctgctctgcctggcggtgccaatccacgcagacagtatgcccagtttcgttaagactcct
gaagatcagacagggatttcaggaggggtggcatcattcgtgtgccaggcggtcggagaa
cccaaacctcgcattacctggatgaagaagggcaagaaagtcagctctcagcgcttcgag
gtaatagagtttgatgacggctcaggctctgtgcttcggatccagccattacggacacat
cgagatgaggcgatttacgagtgcacagctaccaacagtgttggagaaattaacactagt
gcaaaactcactgtattagaagaggaccagatccctcatggtttccccactatagacatg
ggtccccagctgaaagtggttgaacggacgcggacggccaccatgctctgtgccgccagc
ggaaacccagacccggagatctcctggttcaaagactttctgcctgtcgacatcaacagc
agcaacggacgaatcaagcagctccgttcaggagcgctgcagatcgagaacagcgaggaa
tcagaccagggcaagtatgaatgtgtggcggtgaacagcgcgggaactcgatactcggct
cctgcaaacctctacgtcagagtccgacgggttcccccacgtttttcaatccctccaacc
aatcacgaggtgatgccgggtggcagtgtgaacctcacctgcgtggcagtgggcgctcca
atgccctatgtgaagtggatgaagggcgaacaggagctgaccaaagaagaggagatgccc
attggccgaaatgtgctggagctcaccaacatccgccagtcggggaactacacctgcgtg
gccatatcatcactgggcatgatcgacaccacagcgcagatcactgttaaagctcttcct
cgtcctccagcctctctgattgtcactgaaaccaccgccaccagtgtgactttaacatgg
gattctggcaacccagaacccgtatcatattacgtgatccagtatcgatccaaaatctct
gacaatggtttccaggaggtggacggcgtggcatccacccgctacagcatcggcgggttg
agtccgtactcagagtatgagtttcgagtaatggcggtcaataacattggtcgcgggccg
cccagcgggatggtggagactcgtaccagtgaacaggcaccgtcatctcctccgctgcgc
gttcaagcccggatgttgagcgctacgactatgctggtgcaatgggaacctcctgaagag
cccaacggacagattcgaggatatcgagtgtactacacgtctgacctgcacttcccgctc
agcacatggcagaagcacaacacagaggacagcagtctgaccaccatctccggcctggtt
cctgacatcacgtatgggctccgtgtgctggccttcacctctgttggagatggaccacct
tccgatatactgcaggttaaaacacagcaaggagtccctgctcagccgactggttttgaa
gctgaagccgagttggacacgcggatcatgctgtcatggttgtggcccgtccaagatcag
atcaccaaatatgagctcacatactgggaggctgactctgacaacaagcatcatgtcatc
tttgacccggccggttcatatgctattgacagcctgaaaccagacactctctataaattc
tctctggcggcgcgctctgagatggggctcggggtttacacacagcctatcgaggcccgc
acagcccagtccgccccgtccgctcccccacaagaggtgcacctgatcagcctgagctcc
agcagcatcaaggtgagttgggtggcccctccggccgccagccggcacggcagcatcgtc
cgctactctctggcctatcaggcagtgtctggcgaggaccaggagcgccacgaggtcaaa
gacatccctgctgatgtgtccagctatgttctggagggtctggagaaatggactgagtat
acggtgtgggtcaaagcgcacacagatgtgggtcccgggccagaaagtggcagcacccgc
atcagaacccaagaggatgtgcctggtgctcctccacgcagggttgaggtggacaacatc
aactccactgcactgcgtgtgtcctggaagccgcctctgcagcagaaacaacacggccac
atacgtggatatcaggtggtttactcacgcctggagaatggagagccgcgcggacagccc
atcattctggacgtggcgctgccagaggcacaggaggccgtgatcagtggtcttctccct
gaaaccacatattcagtgactgtagccgcgtacaccactaaaggagatggagcgcggagc
aaagccaaagtggtgaccacaacaggagcagttccaggaaagcccactatgatcatcagc
accaccataggcaacacggctctgatccagtggcagccgcctaaagagatggtgggagag
ctgatgggctacagactccgctataagcgtgaagaagaggatatttacactgtccgagac
ttcagacgcactgatgaccacttcactgtcaccggcctgcacaagggcgcgacgtacatc
ttcaaactctgcgctaaaaaccgcgccgggaatggagaggagtacagcaaagagatcagc
accccggaggatgtgcccagcagttacccacaaaacctcaaagtcgttggattgaccaca
accaccacaaaactagcctgggatcctccgccgctgcccgagaggaatgggaagatcgta
cgatatgtggtggtttatcgagacattaacagccatcagaatcagaccaacggcacagcg
gacacggagatgaccattcagggcctgaagccggacaccacctatgatatcagggtgagg
gcgtttacagggaaaggtggaggtcccatcagccccagcatccagagcagaaccatgtct
acctccatgcccgagttcacgaaaaactttggtgtgaaagccgtgatgaagacctctgtc
ctgctcacatgggaggtgccagaaacatacaagtctcaagtgcctttcaagatcctgtat
aaccagcagagtgtggaggtccagggtgacctgaagaggaagctgattacgcgtctgcag
ccggacactgattactcctttgtcctgatgagtcgggggaacagcgctggcggactgcag
cagcaggtctccatccgcaccgctccagacctgttcactaccaaaccagcacaccagaaa
ctagacccagaggagggcggcaaactcgccatcacactgcccgaagtgcacaacagcgcc
ctcgtcaggtggttttatatcgtggttgtaccagtaactccttcaactctccgccattgg
gaaaacccagaagatattgatctggatgagctgatggggaataatagagacgcagctgtg
aggaggaggagaagacaaactcaggactttctgcggccttacattgctgccaagctggag
tctcttccagaaagatttgtgttgggagatgagaaaacctacagcaactactacaacaaa
cctctgccgggacagcagcagtatcgcacatttatactggcggcactgaaagacagagac
tcgacgttcacagtgagtccgttctctgagcccatgatggtgaagctccacagcgggatg
tcccgtcacgtggaggacccggagatgctgtgggtgatgggaccagtgttagccgtggtc
ctcatcatcatcatcgtcatcgccatcctgctcttcaagaggaagcgcacgtctccctca
gctaaagatgagcactcagctggagttaaagatcacctgctggctcattcgtcagatcca
gtggagatgaggaggctcaactaccagacacaaggaatgcgggaacaccctccagtgtct
gtgtgtgctttggctgaccacatcgagcggctgagagccaacgacagcctccgcttctcg
caggagtatgagtctgttgaccctggccagcagttcacctgggaaaactccaacttagag
gtcaacaagcccaagaaccgctacgcaaacgtcatcgcttacgatcactccagggttgtg
ctgactcctgtggatggtgttcccggaagtgactacatcaatggaaactacattgatggc
taccgtaagcagaacgcctacatcgccacgcagggtccgctgcctgagacgctcagtgac
ttctggaggatggtgtgggaacagagaaccagcactatcgtcatgatgacccgactggag
gagaagagcagggtgaagtgtgatcagtactggccaagccgaggaacagagacttacggg
atgattcaagtgtccatgctggatacggtggagctggccacatacagcgtcagaaccttc
gctctctacaagaatggatccagcgagaaacgggaggttcggcagttccagttcatggcg
tggccggatcacggtgttcccgaatatcccacacccattttagccttcttacgcagggtc
aaagcctgcaacccacctgacgcgggacccatggtggtgcactgcagcgctggcgtgggt
cggacgggctgtttcatcgtaatagacgccatgctggagcggatgaagcacgagaagtcg
gtggacatctacggtcacgtgacctgcatgcgttctcagaggaactacatggtgcagaca
gaggatcagtacattttcattcacgaggccctgctggaggctgccacctgcgggaacaca
gaggtgccggcgcggagcctctacacacacatccagaaactcacacaggcgccgcctgga
gacaccgtcaccgccatggagctcgaatttaagaaactggccaactctaaagcacacacc
tccagattcatcagcgctagtctgccctgcaacaaattcaagaaccggctggtgaacatc
atgcctttcgagtccagccgtgtttgtctgcagccaatcagaggcgtggagggctccgac
tacatcaacgccagcttcatcgacggatacaggcagcagaaggcatatatcgccactcaa
ggcccgctgtctgaaaccacagaggacttctggaggatgctttgggagcacaactccacc
atcgtggtgatgctgacgaagcttagagagatgggacgggagaaatgtcatcagtactgg
cctgcagagagatctgcgcgctaccagtatttcgttgtggatcctatggctgaatataac
atgccacagtacatcttacgggagtttaaagtcacagacgccagagatggccagtctcgg
actatccgacagtttcagttcacagattggccggaacaaggtgtgccaaagacaggagag
ggctttattgattttattggtcaagtccacaaaaccaaggagcagtttggacaggacgga
ccaattactgttcactgcagtgccggtgtgggcagaacaggcgtcttcatcactttaagt
attgttctggagcggatgaggtatgaaggagtggtggacatgttccagaccataaaaaca
ctccgcacgcagagacctgccatggtacagaccgaggaccagtaccagctgtgctacaga
gcagctctggagtacctgggcagcttcgatcactatgcaacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (16)   
   UniProt (1)   
   RefSeq(pep) (15)   
DNA sequence (21)   
   RefSeq(nuc) (15)   
   GenBank (3)   
   EMBL (3)   
Protein domain (16)   
   Pfam (16)   
All databases (79)   

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