KEGG   Danio rerio (zebrafish): 286832
Entry
286832            CDS       T01004                                 
Symbol
lamc1
Name
(RefSeq) laminin subunit gamma-1 precursor
  KO
K05635  laminin, gamma 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    286832 (lamc1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    286832 (lamc1)
SSDB
Motif
Pfam: Laminin_EGF Laminin_N Laminin_B Alanine_zipper DUF4047 Death
Other DBs
NCBI-GeneID: 286832
NCBI-ProteinID: NP_775384
ZFIN: ZDB-GENE-021226-3
Ensembl: ENSDARG00000036279
UniProt: Q1LVF0
Position
2:35880600..35979095
AA seq 1593 aa
MSLFSCLLLWTLWAACSHGAMDECIDEDDRPQRCMPEFVNAAFNATVVATNTCGSPPEEF
CVQTGVTGVTKSCHICNAADPRLHHGAVYLTDYNQPVQPTWWQSQTMLAGIQYPNSINLT
LHLGKSFDITYVRLKFHTSRPESFAIYKRSSEDGPWTPYQYYSGSCEKTYSKNNRGFIRT
GEDEQQALCTDEFSDISPLYGGNVAFSTLEGRPSAYNFDNSPVLQDWVTATDIRVTLNRL
NTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEYSKLVCNCKHNTEGADC
NVCKPFYNDRPWRRATAENPNECLPCNCNGKSAECYFDPELYRATGHGGHCRNCADNTDG
PKCERCLANYYREASGQRCLSCGCNPVGSLSTQCDNTGRCSCKPGVMGDKCDRCQPGYHS
LSEAGCRPCSCNPAGSTQECDVQTGRCQCKENVDGFNCDRCKLGYFNLDPQNPQGCTPCF
CFQHSTVCESADGYSVHKITSTFDRDDEGWKGKQRDDSSVPVQWSPSSGEISLISEDYFP
IYFVAPDKFLHNQLLSYGQNLTLNFRIQRHDARLSAEDVVLEGSGLRVAVPLIAQGNSYP
GEETQTFVFRLHDTTDYPWRPTIKHADFQKLLYNLTSIMIRGTYSAQSAGYLDNVSLVTA
RRGPGTPARWVEKCTCPQGYLGQHCEQCDQGFRRSRPELRRFSTCERCNCNGHSDTCDPE
TGMCNCQHNTAGLSCERCKDGFYGDSTVGSSSDCKACPCPAGATCAVVPKTNEVVCTNCP
TGTTGKRCELCDDGFFGDPLGEKGPVRACRACSCNNNIEPNAVGNCNRESGECLKCIYNT
AGVFCDRCKQGFYGDARAANVADKCKPCKCSPYGTVDRQTACSQVTGQCPCLPHVINRDC
GACELGFYNLQSGKGCERCNCNPIGSTNGQCDIVSGQCECQPGVTGQHCERCEVNFFGFS
SSGCKPCDCDPEGSESAQCKEDGRCHCRPGFVGSRCDMCEENYFYNRSTPGCQQCPNCYS
LVRDKVNQQRQKLLDLQNLIDSLDNTETTVSDKAFEDRLKEAEKTIMDLLEEAQASKEVD
KGLLDRLNNINKTLNNQWNRLQNIKNTVDNTGAQADRARNRVRDAENLINTAREELDKAK
EAISKVDIKIPTTSGDPNNMTLLAEEARKLSEKHKADADQIEKIAKDANDTSTKAYNMLK
KALDGENKTSSDIDELNRKYLEAKDLAKNLEKQAAKVHAEAEEAGNKALKIYANLTSLPP
INTKTLEDDANKIKKEASDLDKLIDKTEKEYNDLREDLRGKETEVRKLLDKGKTEQQTAD
QLLARADAAKALAEEAAKKGKSTFQEAQDILNNLRDFDKRVNDNKTAAEDAMRRIPQINA
TINEANDKTRRAEAALGNAAADAKDAKAKAEEAEKIANDVQKGSAKTKADAEKAFEDTMK
LDKDVDKMMDQLTAAEKELEKKKAEADTDMMMASMASDNAKDAEGNARKAKSAVREVLNT
INALLGQLGNIDKVDLSKLNQIDNALKDAKDKMAGSELDRKLKELNDIAKSQEDMISDYD
RQIQEIRADIANLNDIKNTLPEGCFNTPSLERP
NT seq 4782 nt   +upstreamnt  +downstreamnt
atgtcgctttttagctgtttgttgttatggactttgtgggcagcgtgcagtcacggagcg
atggatgaatgtatagacgaggatgatcggcctcagcgctgcatgccggagttcgttaac
gcggctttcaatgcgaccgtggtggccaccaacacttgcggctcgccgcctgaagagttc
tgcgtacagaccggggttacgggagtcactaaatcatgccacatttgcaatgccgcggac
cccagactgcaccacggcgctgtttatctcaccgattacaaccaaccagtacaaccaacc
tggtggcaaagccagactatgttagcgggcatccagtacccgaactccatcaacttgacc
cttcacctgggcaaatctttcgacatcacctatgtgcgtttgaagttccacaccagccgt
cctgagagttttgccatctacaagcgctccagtgaagacgggccttggaccccctaccaa
tactacagtggctcctgtgagaaaacctacagcaaaaacaaccgtggcttcatccgcacg
ggcgaggacgagcagcaggctctgtgtacagatgagtttagcgacatctcgccactctat
ggaggaaacgtggctttctctacgctcgagggccgacccagtgcatataacttcgacaac
agccctgtactgcaggattgggtaactgccactgatatcagagtgaccctgaatcgatta
aacactttcggagatgaagttttcaacgatcccaaagtcctcaaatcctactactacgcc
atctcggattttgctgtgggaggaaggtgcaagtgcaatggccatgccagcgagtgcgtg
aagaacgagtacagcaagctggtgtgtaactgcaaacacaacacagaaggagccgactgc
aatgtgtgcaaacccttctataatgaccgtccctggaggagagccactgctgaaaaccct
aatgagtgtctgccttgtaactgtaatggaaagagcgctgaatgttacttcgaccctgag
ctgtatcgtgccactggtcacggaggtcactgccgtaactgtgctgacaatacagatggg
ccgaagtgtgagcgatgcctggccaactactacagagaggcctccggtcagcgctgtctg
tcctgcggctgcaaccctgttgggtctctcagcactcagtgtgataacactggcagatgc
agctgtaagccaggagtgatgggagacaagtgtgacagatgccaacctggataccactcg
ctctctgaggcaggatgcagaccgtgctcttgtaatccagccggaagcacacaggagtgt
gatgtccagaccggacgctgccagtgcaaggaaaatgtggacggattcaactgtgaccgg
tgtaaactgggctattttaatctggacccccagaatcctcagggctgcactccatgcttc
tgcttccagcattcgacagtgtgtgagagcgcagacggctacagtgtgcacaaaatcacc
tccacctttgacagagatgatgaaggctggaagggtaaacagagagatgactccagtgta
ccggtacagtggtcacccagttctggagagatctcactcatctcagaagattacttcccc
atctactttgtggctccagataaatttctgcataatcagctgttgagttatggtcagaac
ctcacgctgaacttcaggattcagcgtcacgatgctcgcctctcagcagaggacgttgtg
ctggagggctcggggcttcgtgtcgctgtgcctcttattgctcagggtaattcctaccca
ggagaggagacccaaacctttgtgttcagactacatgacacaactgactacccttggaga
cccaccataaagcatgcagacttccagaaacttctctacaatctgacttcaatcatgatc
cgtggaacctacagcgcacaaagtgctggttatttggataacgtgtctctggtgactgcc
cgccggggccctggcactccggcccgatgggttgagaaatgcacgtgtccgcagggttat
ttgggtcagcattgtgagcagtgcgatcagggattcaggaggagccggccagagctgcga
cgcttcagcacctgcgagcgctgcaactgcaatggacacagcgacacatgtgaccctgag
acaggaatgtgtaactgccagcacaacactgctggtttgagctgtgaaaggtgtaaagac
ggcttctatggtgattctacagtgggctcttcttcagactgtaaagcctgtccctgccct
gctggtgccacctgtgctgtggtgcccaagaccaatgaggtggtctgtaccaactgcccg
actggaaccacaggtaaacgatgtgagctgtgtgacgatggtttctttggagatcctctg
ggtgagaaaggtccagtgagagcgtgtcgagcctgcagctgcaacaacaacatcgagccg
aacgctgtgggcaactgtaaccgagagtcgggcgaatgcctcaagtgcatctacaacacc
gctggcgtcttttgcgaccgctgcaagcagggcttctatggtgatgcccgcgctgctaat
gtagccgacaaatgcaaaccgtgcaagtgttctccatatggtacagtagaccgacagaca
gcctgttctcaggtgacgggtcaatgtccgtgtctccctcacgtcattaacagagactgt
ggcgcttgtgaactgggtttctacaatctgcagagtggaaagggctgtgaacgatgcaac
tgcaaccctattggttccacgaatggtcagtgtgacattgtcagcggtcagtgtgagtgt
cagcctggagtcaccggtcaacattgtgagcgatgcgaggtcaacttcttcggattcagt
tcatcgggttgcaaaccatgtgactgtgacccagaaggctcagaatcagctcagtgtaag
gaggacggccgctgtcattgtcggccaggttttgtgggctctcgctgtgatatgtgtgag
gaaaactacttctacaaccgctcgacacctggctgccagcagtgccctaactgttacagc
ctggtcagagacaaggtaaaccagcagagacaaaaactgcttgacctgcagaatttgatt
gatagtctggacaacactgagacgacagtgagcgacaaggcctttgaggacagactgaag
gaggcagagaaaactataatggacttgctggaagaggctcaggctagcaaagaagtggat
aaaggtcttttggaccgtctaaacaacatcaacaagaccctgaataaccagtggaacaga
ctgcagaacatcaagaacacagtagacaacacaggagcacaggcagacagagcacgaaac
cgcgttcgtgatgcagaaaacctgatcaacacagccagagaggagctggacaaagccaaa
gaagccatcagtaaagtggacattaaaatacctacaacctctggagatccaaacaatatg
acgcttctggcagaggaagcccgtaagctgtcagaaaaacataaagcagatgcagatcag
attgagaagatcgcgaaagatgccaatgacacttctactaaagcctataatatgctgaag
aaagcacttgatggagagaacaagacaagcagcgacattgatgaactcaacaggaagtat
ttggaagcgaaagatctggccaaaaatctggagaagcaggcagctaaagttcatgctgag
gcagaagaggccggaaacaaagctctgaagatctatgctaacctgaccagcttacctcca
atcaacaccaaaacattagaggatgatgccaataagattaaaaaggaggcttcagacttg
gacaaactgatagacaagactgagaaggagtacaatgacttgagagaagacttgagagga
aaagagacggaggtccgcaaactgctggacaaaggaaaaactgagcaacagacggctgat
cagttgttggcgcgtgcagacgcagcaaaggctttggctgaggaggcggcaaaaaaaggc
aaatctactttccaagaggctcaggatattctgaacaacctcagagatttcgacaagcga
gtgaatgacaacaaaactgctgctgaggatgccatgaggagaatcccacaaatcaatgca
acaatcaatgaagccaatgataaaaccagacgggccgaggcggctttaggcaatgcagct
gctgatgctaaagatgctaaagcgaaggcagaggaagctgagaaaatcgctaatgatgtg
cagaagggttctgcaaagaccaaggcagacgcagaaaaggcttttgaagacaccatgaaa
ctggataaagatgttgacaaaatgatggaccagctcacagcagcggagaaagagctggaa
aagaagaaagcagaggcggacactgacatgatgatggcatctatggcatcagacaatgcc
aaagatgcagagggcaatgccagaaaagccaaaagtgctgtcagagaagtactcaacaca
atcaatgcactgctaggccaactcggtaacatcgataaggtggatctgagcaagctgaat
cagatcgacaacgctctcaaagatgccaaggacaaaatggcgggaagtgagctggacagg
aagctgaaggagctgaacgacatcgccaagagtcaggaggacatgatcagcgactacgac
cgtcagatccaggagattcgagcagacattgccaacctgaacgacatcaagaacactctg
cccgagggctgcttcaacacgccgtctctagagcggccataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (94)   
   KEGG ORTHOLOGY (1)   
   RefGene (88)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (112)   

Download RDF
DBGET integrated database retrieval system