KEGG   Danio rerio (zebrafish): 30407
Entry
30407             CDS       T01004                                 
Symbol
hoxd13a
Name
(RefSeq) homeobox protein Hox-D13a
  KO
K09298  homeobox protein HoxA/B/C/D13
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30407 (hoxd13a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    30407 (hoxd13a)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN HoxA13_N
Other DBs
NCBI-GeneID: 30407
NCBI-ProteinID: NP_571244
ZFIN: ZDB-GENE-990415-119
Ensembl: ENSDARG00000059256
UniProt: Q90472 B0S5Z0
Position
9:complement(1987370..1990311)
AA seq 256 aa
MDGGGLDEEFINVYPSAFGTHSSRCTSGAPVLSAVDRPTSVCNESISPYFSFPSNIGSGS
FTFGCHLENSYKVPQNAVFPPGVAKQNGQFANKPVDHGEASSWLKEFAFYQGCARSYPRI
PAFIDLPVVQRAMMGDLRHETCLTMEGHQHWDWSNNCSSQLYCFQDQTRSPHIWKPSLTE
EAAAASFCQRGRKKRVPYTKFQLKELEREYNTTKFITKENRRRIASSTNLSERQVTIWFQ
NRRVKDKKRPDVCIKC
NT seq 771 nt   +upstreamnt  +downstreamnt
atggacggaggaggactggatgaagagtttataaatgtttacccatctgccttcgggact
cactcaagccggtgtacatcaggagcgccggtgctctccgctgttgatcgaccgacttct
gtatgcaatgagtctatcagtccttacttttcttttccatccaatatcggctctggctcc
ttcacgtttggatgccatttggaaaacagttacaaagttccacagaacgccgtgttcccg
cctggtgttgcgaagcaaaacggacagttcgccaataaacccgtggaccacggtgaagcc
tccagctggcttaaagagttcgccttttatcaaggctgcgcgcgctcctatccgagaatc
cctgccttcattgatctacctgtggttcagagagcaatgatgggagatcttagacatgag
acttgtttgacaatggaaggccaccaacattgggactggtcaaacaattgcagcagtcaa
ctttattgctttcaagaccagacgcggagcccgcatatctggaaaccatcattaacagag
gaagcagcagcggcttcattctgtcagcgcgggagaaagaagcgggttccttacacaaaa
tttcagctgaaagagctcgagcgtgaatacaacaccactaagttcattacaaaggagaac
agacggcggatcgcttcttctaccaacctgtctgagagacaagtaactatatggtttcaa
aaccgacgggtcaaggataagaagagacctgacgtctgcatcaaatgttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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