KEGG   Danio rerio (zebrafish): 30504
Entry
30504             CDS       T01004                                 
Symbol
opn1mw4
Name
(RefSeq) green-sensitive opsin-4
  KO
K04250  rhodopsin
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    30504 (opn1mw4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:dre04030]
    30504 (opn1mw4)
G protein-coupled receptors [BR:dre04030]
 Rhodopsin family
  Vision
   Opsin
    30504 (opn1mw4)
SSDB
Motif
Pfam: 7tm_1 Rhodopsin_N 7TM_GPCR_Srw 7TM_GPCR_Srsx 7TM_GPCR_Srv TAS2R DUF2633
Other DBs
NCBI-GeneID: 30504
NCBI-ProteinID: NP_571329
ZFIN: ZDB-GENE-990604-43
Ensembl: ENSDARG00000000638
UniProt: Q9W6A6
Position
6:41200505..41202554
AA seq 349 aa
MNGTEGNNFYIPLSNRTGLARSPYEYPQYYLAEPWQFKLLAVYMFFLICLGFPINGLTLL
VTAQHKKLRQPLNFILVNLAVAGTIMVCFGFTVTFYTAINGYFVLGPTGCAIEGFMATLG
GEVALWSLVVLAVERYIVVCKPMGSFKFSASHAFAGCAFTWVMAMACAAPPLVGWPRYIP
EGMQCSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTVKAAAAQQQES
ESTQKAEREVTRMVILMVLGFLIAWTPYATVAAWIFFNKGAAFSAQFMAVPAFFSKTSAL
YNPVIYVLLNKQFRNCMLTTLFCGKNPLGDDESSTVSTSKTEVSSVSPA
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgaacggcactgaaggaaacaacttctacatccccctgtccaacaggacagggctagca
aggagtccgtacgaatatcctcagtattatcttgcggagccatggcaatttaaactgctc
gccgtctacatgttcttcctcatctgcttaggtttccccatcaatggccttacattgttg
gtaacagctcaacacaaaaagctgaggcaacctctcaacttcattctggtcaatctggct
gtggctggcaccatcatggtttgttttggattcacggtcactttctacacagccattaat
ggatactttgttctgggaccaactggctgtgcgattgagggattcatggccacactggga
ggcgaagttgccctttggtcacttgtagtgctggccgttgagagatacattgtggtttgc
aagccaatggggagtttcaaattttctgccagtcacgctttcgcaggatgcgcattcaca
tgggtaatggccatggcttgtgcagctccccctctggttggttggcccaggtatattccg
gagggaatgcagtgttcatgtggaccagactactacaccctgaacccagagtacaacaac
gaatcatatgtcctctacatgttcatctgtcattttatacttccagttactataatcttc
ttcacctatgggcgacttgtttgcacagtcaaagcggctgcagctcaacagcaggaatca
gaatccactcagaaggctgagagagaagtgaccagaatggtcatcctgatggttctgggc
ttcctgattgcttggactccttatgctactgttgctgcctggatcttctttaataaggga
gctgctttcagtgctcagttcatggctgttcctgcctttttctcaaagacctctgcattg
tataaccctgtcatctatgtgctgctaaataaacagtttcgtaattgcatgctgaccact
ctattctgtggaaagaatcctcttggcgatgatgaatcctctactgtgtccaccagcaag
acggaggtgtcttctgtatctccagcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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