KEGG   Danio rerio (zebrafish): 30529
Entry
30529             CDS       T01004                                 
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    30529 (sox3)
Transcription factors [BR:dre03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    30529 (sox3)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 PSMbeta
Other DBs
NCBI-GeneID: 30529
NCBI-ProteinID: NP_001001811
ZFIN: ZDB-GENE-980526-333
Ensembl: ENSDARG00000053569
UniProt: Q6EJB7 A9JSZ3
Position
14:complement(32742701..32744464)
AA seq 300 aa
MYNMMETEIKSPIPQSNTGSVTGGKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYDMAGLQYPMMSTAQTYMNAASTYSSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSADHSSLQTSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtataacatgatggaaaccgagattaaaagccccattccgcagtccaacacgggctcg
gtgacgggcggcaaaaacaacagtgccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtctcgcgggcagcggaggaagatggctcaggagaatcctaaaatg
cacaactcggagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacccttcattgacgaggccaagcggttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattct
ttgccagggggactcctggcgcccggtgccaacgctgtcaacaacgcggtgtcggtgggc
cagcggatggactacacgcacatgaacggatggacgaacagcgcatactccctcatgcag
gaccagctggcctaccctcaacatcccagtatgaacagcccccagatccagcagatgcac
cggtacgacatggcgggacttcagtacccaatgatgtccacggctcagacctacatgaac
gccgcgtccacgtacagcagcatgtcaccagcatacacgcaacaaacttccagtgcaatg
ggtttgggctccatggcttcggtgtgcaagacggagcccagctcccctcctccggccata
acctctcactctcagcgtgcttgtttgggagacctgagagatatgataagcatgtacctg
ccgcccggtggagacagcgccgaccactccagtctacagaccagtcggttacacagcgtt
catccgcactatcaaagcgcagggacaggcgtgaacggaacgctacccctaacccacatt
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (4)   
   Pfam (4)   
All databases (30)   

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