KEGG   Danio rerio (zebrafish): 30582
Entry
30582             CDS       T01004                                 
Symbol
opn1sw1
Name
(RefSeq) opsin-1, short-wave-sensitive 1
  KO
K04252  short wavelength-sensitive opsin
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:dre04030]
    30582 (opn1sw1)
G protein-coupled receptors [BR:dre04030]
 Rhodopsin family
  Vision
   Opsin
    30582 (opn1sw1)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srv 7tm_4 7TM_GPCR_Srw 7TM_GPCR_Srsx TAS2R
Other DBs
NCBI-GeneID: 30582
NCBI-ProteinID: NP_571394
ZFIN: ZDB-GENE-991109-25
Ensembl: ENSDARG00000045677
UniProt: Q9W6A9
Position
4:complement(13577665..13580318)
AA seq 336 aa
MDAWAVQFGNASKVSPFEGEQYHIAPKWAFYLQAAFMGFVFIVGTPMNGIVLFVTMKYKK
LRQPLNYILVNISLAGFIFDTFSVSQVFVCAARGYYFLGYTLCAMEAAMGSIAGLVTGWS
LAVLAFERYVVICKPFGSFKFGQGQAVGAVVFTWIIGTACATPPFFGWSRYIPEGLGTAC
GPDWYTKSEEYNSESYTYFLLVTCFMMPMTIIIFSYSQLLGALRAVAAQQAESESTQKAE
REVSRMVVVMVGSFVLCYAPYAVTAMYFANSDEPNKDYRLVAIPAFFSKSSCVYNPLIYA
FMNKQFNACIMETVFGKKIDESSEVSSKTETSSVSA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggacgcgtgggccgttcaattcggaaatgcttccaaagtcagccccttcgagggcgaa
caataccacattgcccccaaatgggcgttctacctgcaggcagctttcatgggctttgta
tttatcgtgggcacacctatgaacggaatcgtcctcttcgtcacgatgaagtacaagaaa
ctcaggcagcctctcaactacatcttggtaaacatctccctagcaggcttcattttcgac
acgttctctgtaagtcaagtattcgtctgcgctgctagaggttattacttccttgggtat
acgttgtgtgcgatggaagcggcaatgggatcgattgcaggtcttgtgacgggatggtcc
ttggctgttctggctttcgagagatatgtggtcatctgcaaacccttcggaagcttcaaa
ttcggacaaggccaggctgttggagctgtggtgttcacctggatcattggtaccgcctgt
gctactcctcccttctttggatggagcagatacattcccgagggtcttggcactgcctgc
ggacctgactggtacacaaaaagcgaggagtacaactcagagagctacacttacttcctt
ctcgtcacctgcttcatgatgccaatgaccatcatcattttctcctactcacagctcttg
ggagccctgcgcgccgttgcagcccagcaggccgagtcagagtccacccagaaggcagag
agagaagtgtccaggatggttgttgtaatggttggctctttcgtgctttgctatgcccct
tatgccgtcaccgccatgtattttgccaattccgatgagccaaacaaggattaccgcctg
gtcgccatccctgctttcttctcaaagagctcctgcgtgtataatcccctaatctacgcc
ttcatgaacaaacagttcaacgcctgcatcatggagactgtatttggcaagaagattgat
gagtcctcagaggtttccagcaagaccgaaacctcatctgtgtctgcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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