KEGG   Danio rerio (zebrafish): 321614
Entry
321614            CDS       T01004                                 
Symbol
wdr82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    321614 (wdr82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    321614 (wdr82)
   03036 Chromosome and associated proteins [BR:dre03036]
    321614 (wdr82)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     321614 (wdr82)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     321614 (wdr82)
    COMPASS/SET1 complex (yeast)
     321614 (wdr82)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40 PQQ_2 MinC_C
Other DBs
NCBI-GeneID: 321614
NCBI-ProteinID: NP_001159740
ZFIN: ZDB-GENE-030131-333
Ensembl: ENSDARG00000014083
UniProt: Q6NV31
Position
6:41453078..41460616
AA seq 313 aa
MKLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKLQYERTCEWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKG
VILEASFTPDSQFIMIGSEDGKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctcacagacagtgtgctgaggagtttcagggttgcgaaggttttccgagagaac
tccgacaaaataaactgctttgacttcagttcaaatggagaaactgtaatatcgagtagc
gacgatgactcgattgtcttgtacgactgccaggagggaaaacccaaacggacgctttac
agtaagaagtatggtgtggatctcatcagatacacccatgcagccaacacagtcgtctac
agctctaacaagattgacgatactatacgatacctgtctctacatgacaataagtacatt
cgctactttcctggacacaataaaagggttgtcgccctgtctatgtcccctgttgatgac
acattcatttctggctcccttgacaaaaccattcgtctgtgggaccttcgctcgcctaac
tgtcaaggccttatgcacctgcaagggaaacctgtgtgctcatttgatcccgaggggttg
atttttgctgcaggagtgaattctgagatggtcaaactttatgatttgcgctcttttgat
aagggcccatttgccacatttaaactgcaatatgagcggacgtgtgagtggacgggtctc
aagttcagcaatgatggaaagctcattctggtctccaccaatggaggaacactcagagtg
ctggatgcttttaaaggagctgttctccactcgtttgggggttataacaacagtaaaggt
gtcattttggaggcttctttcacaccagactctcagttcattatgatcggatcagaagat
gggaagatccatgtgtggaatgctgagagtgggatgaaagtagcgcttctggatgggaaa
cacactggtcctgttacctgtctacagtttaaccccaaattcatgacctttgccagtgcc
tgttctaacatggcgttctggttacccaccattgatgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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