KEGG   Danio rerio (zebrafish): 322997
Entry
322997            CDS       T01004                                 
Symbol
ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    322997 (ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dre01009]
    322997 (ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    322997 (ell2)
Protein phosphatases and associated proteins [BR:dre01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     322997 (ell2)
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     322997 (ell2)
    Little elongation complex (LEC)
     322997 (ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 322997
NCBI-ProteinID: NP_001077281
ZFIN: ZDB-GENE-030131-1717
Ensembl: ENSDARG00000006251
UniProt: F1R2K7 Q5U3C7
Position
21:11749104..11774965
AA seq 655 aa
MMAALCEDGTYGLNCGRKSDKISVLHVKLTESAFKALESYQNCKNAPSTQATIRFQGLQG
RIKIPTTEASDGSHNFNFYLSNFGKDNPQGSFECIHQYISSSGIPHLSSLGTIQDKITVC
ATNDSYQVTKERVTKAEEDKSKNSTKFIKPGGPFRDKKIHRKPAPSAPDPVPERKQTTPL
NPANTIRKCLTNNPVSQKPYRDRVIHLLALRSYKKLEVLARLQRDGVSQKDRNSLGTTLH
QVANLNPKDNSYSLKDFIFREVQRDWPGYTEDDRVQVDRILARKLGLNLESVSSNSPTKE
PTSPLKRQPETDFIDPLMPKKPRISHLSNRGPPSSSRHPSETEDKKPAPTVACPGPSFPP
PPVTGSSSNSPSTPEGLGSQDLPLDQSSICGNSSESYAPRSQTPSPPNQPASTTSPSSFS
TCTVSTTTITSTTTTSGSHQVSSAASPTDDSGSKKPKKSKKHKDKEKKREGEREKEKDRE
RKRDREHRKEDLADKDAQPRKKHRSEAEQKHIPANISHDSDREAGKEKPVNSTELPAPTK
PDYISKYTAVISMDQRQHYKDDFNGEYDEYRILHARVESVTRRFTKLDAQCRRLAPGTKE
YQEVHEQVLQEYKKIKQHSPNYYEEKQRCEYLHNKLAHIKRLIADFDQRRAQSWL
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgatggcagctctctgcgaggatggcacatatggactcaattgtggccgcaagagcgac
aaaatatcagttttacatgtcaaattgacagaatcagcctttaaagcgctagaaagctac
caaaactgtaagaatgcaccgtccacacaggcgacgatacgatttcagggtcttcaaggg
cgcattaaaattccaaccacagaggcttccgatggctctcataacttcaacttttatctg
tccaactttggcaaagacaatcctcaaggaagcttcgagtgtatccaccagtacatatct
agctctgggatcccccatttgtcttcgcttggaacgattcaagacaaaatcacagtatgc
gccaccaatgattcctatcaggtgaccaaagagcgtgtgaccaaagcagaggaggacaaa
agcaagaacagcaccaaattcatcaaacccggaggaccgttccgagacaaaaaaatccac
cgaaaaccggccccgtcagcccccgacccggttccagaaaggaaacagaccacccccctc
aacccagccaacaccatccgcaagtgccttaccaacaaccctgtgtcacaaaagccgtac
cgggaccgcgtgattcaccttcttgccctgcgctcctacaagaaacttgaggttctcgcc
agactgcaaagagatggcgtcagccagaaggaccgcaattctttaggcactacactacat
caggtggccaatctaaaccctaaggataactcttattcgctgaaggactttattttccgt
gaggtccagagggactggccgggctacacggaggatgatcgagttcaggttgacagaatc
ctggcacgtaaattgggcttgaatttagagtctgtctcgtccaacagtccaaccaaagag
ccaacatctccactgaaacggcaaccggagacagacttcatcgaccctttgatgcctaag
aagccccgaatctctcatctcagcaatcgaggaccaccgtcgtcaagtcgtcatccgtcg
gaaactgaggacaaaaaacccgcacccacggtcgcttgcccgggtccctcttttccccct
ccccctgtcaccggctccagttcgaactcccccagtacgccggagggccttggctctcag
gaccttcccctggaccagagctctatatgcgggaactcttcggagagctacgccccccgc
agccaaacgcccagcccccccaaccagccagcgtccacaacgtccccctcatccttttcc
acctgtaccgtctccacaaccaccatcacctccaccactaccaccagcggcagccatcaa
gtgtcttctgccgcatctcctacagatgacagtggcagcaaaaaacccaagaagtccaag
aagcacaaagataaagagaagaaacgcgaaggagagcgagaaaaggagaaggacagagag
cggaagagggatcgagagcatcgcaaggaggatctggctgacaaggacgcgcagcctagg
aagaaacaccggagcgaggcagaacaaaaacacattcctgccaacatcagccatgattcg
gatagagaagctggcaaagagaagcctgtcaatagcactgaacttccagccccaactaag
cctgattacataagtaagtacactgcagtcatatcaatggatcagaggcagcactataaa
gacgacttcaatggagaatatgatgagtatcgtatccttcatgcccgcgttgagagcgtt
acacgccgttttaccaaactggatgctcagtgtagacggctagcaccgggaactaaggag
taccaggaagtgcatgaacaggtgctgcaagaatataaaaaaattaaacaacacagccca
aactactatgaagaaaaacagcgctgcgagtacctgcacaacaaactagcccacatcaag
cggctcatcgctgacttcgaccagcggagggcgcagtcctggctgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
Protein domain (2)   
   Pfam (2)   
All databases (72)   

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