KEGG   Danio rerio (zebrafish): 324743
Entry
324743            CDS       T01004                                 
Symbol
snupn
Name
(RefSeq) snurportin-1
  KO
K13151  snurportin-1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    324743 (snupn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    324743 (snupn)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    324743 (snupn)
SSDB
Motif
Pfam: Snurportin1 mRNA_cap_enzyme DUF6724
Other DBs
NCBI-GeneID: 324743
NCBI-ProteinID: NP_955988
ZFIN: ZDB-GENE-030131-3464
Ensembl: ENSDARG00000008395
UniProt: Q6P5J9
Position
25:complement(6435699..6447855)
AA seq 365 aa
MEALTEALSGSFSVSREINSTSAPHPRLAQYKSKYSVLEQGERRRRFLELQKEKRLNYVN
HARRLADGDWSTADSEDEEEAEKKSLQTENGADEEGMEVEPRKKLPKHYANQLMLSEWLV
DVPADLSSDWLMVVCPVGKRSLVVASKGSTTSYTKSGYCVNRFPSLIPGGNRHNSALGKD
YTILDCIYSDVDRTYYILDVMCWRGHPVYDCSTEFRFYWLQSKVDEVESLSEISKINPFR
FVALSSISCSTESIQMALAHEYSYKVDGLLFYHKETHYTPGSTPLVGWLRPYMVADILGM
DVPECPLTSKPDYASHQLQQILEHKKTSTEVRPADQNGRYELEHLSTPETPTQNSHPAQK
ENMET
NT seq 1098 nt   +upstreamnt  +downstreamnt
atggaggctctgaccgaggctctgtccggcagtttctcggtgtccagggaaataaacagc
acatctgctcctcatccccgcctggcgcaatacaagagcaaatacagcgtgctggagcag
ggagaacggcgcaggaggttcctggagctgcagaaagagaagaggctgaactacgtgaat
cacgctcgtcgtctggcggatggagactggagcacagccgacagtgaggatgaggaggag
gcagagaagaagagtctgcagacggagaacggcgcagatgaagagggcatggaggtcgag
ccgaggaaaaaactgcccaaacattacgccaaccagctgatgttgtcagagtggttggtg
gatgttcctgcagatctgagctctgattggctgatggtggtttgtccagttgggaaacgg
tcacttgttgtcgcatccaagggatctacaacatcttacaccaaaagcggctactgtgtg
aatcgcttcccttctctgatccccggcgggaacagacacaactctgctctgggcaaagat
tacaccatcctggactgcatctacagcgacgtggacagaacatattacatcctggacgtc
atgtgctggaggggacatcctgtgtacgactgctccacggagttccgcttctactggctt
cagtctaaagtggacgaggttgaaagtctttctgaaatttccaagattaatcctttcaga
tttgtggccttgagtagcatcagctgttccacagagtccatccagatggctctcgcacat
gaatatagctataaagtggacggtcttctgttctaccacaaggagacgcactacaccccg
ggcagcacgccattggtcggatggctcagaccttacatggtggccgatatattagggatg
gatgtgccagagtgtcctctcactagcaaacccgattatgccagccatcagcttcagcag
atcctggagcacaagaaaacatccacagaagttcggccggcagatcaaaatggccgatat
gaactcgaacacctctccactcctgagacaccaacgcagaactcacaccccgctcagaaa
gaaaacatggagacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (31)   

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