KEGG   Danio rerio (zebrafish): 325494
Entry
325494            CDS       T01004                                 
Symbol
pars2
Name
(RefSeq) probable proline--tRNA ligase, mitochondrial
  KO
K01881  prolyl-tRNA synthetase [EC:6.1.1.15]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    325494 (pars2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:dre01007]
    325494 (pars2)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dre03016]
    325494 (pars2)
Enzymes [BR:dre01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.15  proline---tRNA ligase
     325494 (pars2)
Amino acid related enzymes [BR:dre01007]
 Aminoacyl-tRNA synthetase
  Class II (C/G)
   325494 (pars2)
Transfer RNA biogenesis [BR:dre03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    325494 (pars2)
 Prokaryotic type
    325494 (pars2)
SSDB
Motif
Pfam: tRNA-synt_2b HGTP_anticodon zf-piccolo
Other DBs
NCBI-GeneID: 325494
NCBI-ProteinID: NP_991118
ZFIN: ZDB-GENE-030131-4219
Ensembl: ENSDARG00000044404
UniProt: Q6P0C4
Position
6:complement(30684699..30689104)
AA seq 477 aa
MESVMHHCHRKLPTLLSRTLFKTLKRRHLNLTIHTVSASSKPVIPTPLVSRLFQPSNLRE
GQDGGDLTCRSQRLMVQTGLIHPSNPGCFYYLPVALRSLEKLVRLIDEEMHAIGGQKVDM
PALCSAELWKKSGRWELMGKEMFRLLDRHNGEYCLGPTHEEAVTELFASQTTMSYKKLPL
LLYQVTRKFRDEQKPKFGLLRGREFYMKDMYSFDINEEAALHTYNSVCQAYRRILDRLHL
KWVQVQADTGNIGGTLSHEFQLPADIGEDKLLVCGNCGFSANIETMEPGQAKCSQCQTGK
LTESRGIEVGHTFYLGTKYSQAFKALFVNASNVPAVAEMGCFGLGVTRILAASIEVMSTE
DAIHWPGLIAPYQVCVLPPKKGSKAHEATQKAEELAQSLGNSLPNLRGEVVLDDRTQMTI
GKRLKDAKILGYPFVVVVGQTALDDLASFEVVCQQSGETLFLSKDGLVDLLSTVETI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atggagtcagttatgcatcactgccatcgcaagctcccaaccctcctgtccagaactctc
tttaaaacattaaagagaagacacctcaacctcaccatccacactgtttctgcctcttcc
aaaccagtcatcccaacaccgctcgtgtctcgcctcttccagccatcaaacctccgggaa
ggtcaggatggaggagacctgacatgtcggagtcagagactgatggtgcagactggactg
atccatccgtcaaaccccggctgcttctattacttgcctgtggctctgaggtccttggag
aagctggtccggctcattgatgaggagatgcatgcgatcggtgggcagaaagtggacatg
ccggcgctctgcagtgcagaactgtggaagaaaagtggtcgctgggagctcatgggaaaa
gagatgttcagactgctggatcggcacaatggggaatactgtctcggaccgactcacgaa
gaagcagtcactgagctttttgcctcccagaccaccatgtcttacaagaagctgccactt
ctgctctaccaggtaacacgcaaattccgtgatgagcagaagccaaaatttggactctta
cgtggtcgggaattctacatgaaagacatgtattcatttgacattaatgaggaggcagct
ctccacacatacaactctgtgtgtcaagcgtatagacgtatactcgaccgactgcacttg
aagtgggtgcaggtccaggctgacactggaaacataggaggcacactttcccatgagttt
cagctgccagcagacattggcgaagacaagttacttgtttgtggaaactgcggcttctct
gccaacattgagaccatggaaccaggacaggccaagtgctcgcagtgtcaaacaggcaaa
ctgactgaatccagaggcattgaagtgggccacactttttacctcggcactaaatattca
caggcgtttaaagcactttttgttaatgcatccaatgtgcctgcggtggcagagatggga
tgttttggacttggtgtcactcgaatactagcagcttctatagaggtgatgtccacagag
gatgccattcactggcctggattgatagctccctatcaagtgtgtgtcctgccacctaaa
aagggaagtaaagcacatgaagccacacagaaggctgaggaactggctcaaagcttggga
aacagtcttccaaatttgagaggtgaggtggtactggatgacaggactcaaatgaccatt
gggaaacgactgaaggatgctaaaattctggggtatccatttgtggtggtggtgggccag
acggctctagatgatctggccagctttgaggtggtttgtcagcaaagtggagagactctc
tttttgagtaaagatgggcttgttgatcttttaagtacggttgaaactatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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