KEGG   Danio rerio (zebrafish): 325550
Entry
325550            CDS       T01004                                 
Symbol
ddx39aa
Name
(RefSeq) DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa
  KO
K13182  ATP-dependent RNA helicase DDX39 [EC:3.6.4.13]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    325550 (ddx39aa)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    325550 (ddx39aa)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1
Other DBs
NCBI-GeneID: 325550
NCBI-ProteinID: NP_001315271
ZFIN: ZDB-GENE-030131-4275
Ensembl: ENSDARG00000006225
UniProt: A2AWA1
Position
1:complement(45205920..45215284)
AA seq 427 aa
MAENDVENELLDYEEDEEPQPTVDSGATTGKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMSSVKCAVFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSR
NKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCV
ALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggccgagaacgatgttgaaaatgagctgttggactatgaggaagatgaggagccacag
cccactgtagacagcggagccaccactggcaagaaggaggttaaagggtcttacgtgtcc
atccacagctccggattccgagatttcctcctgaaaccagagttgctccgcgctatcgtt
gactgtggctttgaacatccttctgaggtccagcatgagtgcatcccacaagccatcctg
ggcatggacatcctgtgccaggcaaagtctggaatgggaaagactgccgtgtttgtgctt
gccacactgcaacagatcgagcctgtggatggacaggtttctgtgttggttatgtgccac
acacgagaactggccttccagatcagtaaagagtacgagcgcttctccaagtacatgtcc
agtgtaaagtgtgccgtctttttcggtggcatgtctataaagaaggatgaagacgtgttg
aagaagaactgcccacacattgttgtgggaacgccagggaggattcttgccctcagtcgc
aacaagaccttgaccctcaaaaacgtcaaacactttgttttggacgaatgtgacaagatg
ctggagcagttggatatgagacgggatgtccaggatatcttcagactgacccctcacgag
aagcagtgcatgatgttcagtgctacattaagcaaagagatcagaccggtctgtcgcaaa
ttcatgcaagatccaatggaggtatttgttgatgacgaaactaagcttaccctgcatggt
cttcagcagtactatgtcaaactgaaggacagcgagaagaaccgcaaattgtttgacctg
ctcgatgttctggagtttaaccaggtggtgatattcgtcaagtctgttccacgctgcgtg
gctctgtctcagttgctggttgaacagaatttccctgccattgcgatccacagaggaatg
actcaggaagaaaggttatctcgatatcagcagtttaaagactttcagcggcggattctg
gtggctacgaatctgtttggtcgagggatggatattgagcgtgttaatattgtcttcaac
tatgacatgcctgaggattcagacacataccttcacagggttgctcgtgctggcaggttt
ggcacaaaaggtttggccgtcacctttgtgtcagatgagaccgatgcgaagatcctgaat
gatgtgcaggaccgctttgaagtcaacgtggccgagttgcctgaggaaatcgacatctcc
acctacatcgagcagtccagatga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (84)   
   KEGG ORTHOLOGY (1)   
   RefGene (78)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (4)   
   Pfam (4)   
All databases (110)   

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