KEGG   Danio rerio (zebrafish): 393168
Entry
393168            CDS       T01004                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    393168 (smu1a)
Spliceosome [BR:dre03041]
 Complex B
  Other components
   Complex B specific factors
    393168 (smu1a)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 LisH_TPL NBCH_WD40 Ge1_WD40 Nup160 RMC1_N TFIIIC_delta zf_topless LisH
Other DBs
NCBI-GeneID: 393168
NCBI-ProteinID: NP_956493
ZFIN: ZDB-GENE-040426-916
Ensembl: ENSDARG00000002538
UniProt: Q7ZVA0
Position
14:6228996..6245748
AA seq 513 aa
MSIEIESADVIRLIMQYLKENSLHRTLAMLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD
GHHAISASSDGTVKVWNMKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDYVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtcagcagacgtgattcgtctgatcatgcagtacctgaaggaa
aacagcttgcatcggactttagcaatgctccaggaggagacgactgtgtccctcaacacg
gtggacagtattgagagttttgtggccgacatcaacagcggtcactgggacaccgtactg
caggctatacagtccctcaaactccctgacaagaccctcattgacctttacgaacaggtt
gttcttgagctgattgaactccgagagttgggagctgccaggtctttgttgaggcagacg
gatcccatgataatgctcaagcaaactcaacccgagcggtacatccatttggagaatctt
ctggcacgctcttactttgacccacgagaggcctatcctgatggaagcagtaaagagaaa
cggagagcagctatagctcaggctcttgctggtgaagtgagtgtggtgccgccatcacgt
ctcatggctctgcttggacagtctctaaagtggcagcagcatcagggtcttcttcccccc
ggtatgactattgatttattcagaggtaaagctgctgtgaaggatgtagaagaggagcga
ttcccaacacagctggccagacacatcaagtttggtcagaagtctcatgtggagtgtgcg
cgcttctctcctgatggccagtatctggtcactggatctgtggatggatttattgaagtg
tggaacttcactactggtaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgatgcggtgctgtgcatgtcttttagtcgggacactgaaatgctggcc
acaggagcccaggatggcaagattaaggtgtggaagattcagagcggtcagtgtctgcgg
cggtacgagcgcgctcacagtaaaggcgtcacctgtctcagcttcagtaaagacagcact
cagattctctctgcgtcctttgaccagactattaggatacatgggttaaaatcaggcaag
tgtttgaaggagtttcgaggccattcttcatttgtgaatgaagccacgctcactcctgac
ggtcatcacgccatcagcgcttcctctgatggaactgtgaaggtctggaatatgaagacc
acagaatgcaccagcacattcaagtctctgggcacctctgcagggactgacatcaccgtt
aacaacgtgattctgcttcccaaaaacccggagcatttcgtcgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcagggccagattgtgaggagtttcagctccggtaaaaga
gaaggaggtgatttcgtgtgctgtactctgtctccgcgtggcgagtggatctactgtgtg
ggagaggactatgtgctttactgtttcagcacagtcacaggcaaactggagagaacgctg
actgttcatgagaaggacgtgatcggtatcgcccaccatccgcatcagaatttaatcggc
acgtacagtgaggatggattgctcaaactctggaagccgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (10)   
   Pfam (10)   
All databases (42)   

Download RDF
DBGET integrated database retrieval system