KEGG   Danio rerio (zebrafish): 393294
Entry
393294            CDS       T01004                                 
Symbol
use1
Name
(RefSeq) vesicle transport protein USE1
  KO
K08507  unconventional SNARE in the endoplasmic reticulum protein 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    393294 (use1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    393294 (use1)
Membrane trafficking [BR:dre04131]
 SNARE
  SNAP-25[C] (Qc)
   Use1
    393294 (use1)
SSDB
Motif
Pfam: Use1 MCU AAR2 DUF3179 DUF1993
Other DBs
NCBI-GeneID: 393294
NCBI-ProteinID: NP_956618
ZFIN: ZDB-GENE-040426-1015
Ensembl: ENSDARG00000007250
UniProt: Q7ZTY7
Position
22:complement(11070842..11079068)
AA seq 258 aa
MATSRLEINFVRLLSRCESLASEKRAETEWRLEKYVGALEEMFVALKKSPSKPTPETLTD
YNRKVDFLKGLLEAEKLPSPAEKSLANQFLAPGRTPTISSERTPASKTVHIQSKARCAGE
MRKELMSSGVSNSALLENDLRHRKSLPVDERQSAAELDQILQHHHNLQEKLADDMLNLAR
NLKNNTLAAQNIIKQDNQTLTQSMRQADVNFEKLKTESERLEQHAKKSVNWFLWLMLIVV
SFTFISMILFIRLFPRLR
NT seq 777 nt   +upstreamnt  +downstreamnt
atggccacgtccagactggagattaatttcgtcagattattgtcgcgctgtgaatcgctg
gcttcagagaaaagagccgagacagaatggagactagaaaagtatgtcggtgctctcgag
gagatgtttgtcgccctcaaaaaaagtcccagcaaacccacaccggaaacgctgacagac
tacaaccgtaaagtggatttcctcaaggggcttttagaggcagagaaactgccgtctcca
gctgagaagtctttagccaatcagtttctggctcccggacgaacgccgacgatctccagc
gagagaacgccagccagcaaaacagtccacattcagagcaaagccagatgtgctggagag
atgcggaaagagttgatgagcagcggtgtgtcaaattccgctttactagagaacgacctc
cgacacaggaaaagtcttccagtagacgagcgtcagtcggcagcagaactggaccaaatc
ctgcagcatcatcacaacctgcaggagaaactggccgatgacatgctgaatctcgcgcgc
aacctcaagaacaacacactcgccgctcagaacatcatcaagcaggacaaccagaccctc
acacagtccatgcgtcaggcggacgtgaacttcgagaagctgaaaaccgagtccgagcga
ctggagcaacacgccaaaaaatccgtcaactggttcctgtggctgatgctaatagttgtt
tctttcaccttcatcagcatgatcctgtttataagactgttcccgcggctcagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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