KEGG   Danio rerio (zebrafish): 393571
Entry
393571            CDS       T01004                                 
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
  KO
K14960  COMPASS component SPP1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    393571 (cxxc1a)
   03036 Chromosome and associated proteins [BR:dre03036]
    393571 (cxxc1a)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    393571 (cxxc1a)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     393571 (cxxc1a)
    COMPASS/SET1 complex (yeast)
     393571 (cxxc1a)
SSDB
Motif
Pfam: CpG_bind_C zf-CXXC PHD PHD_5 ASH2L-like_WH Gal4_dimer
Other DBs
NCBI-GeneID: 393571
NCBI-ProteinID: NP_956893
ZFIN: ZDB-GENE-040426-1142
Ensembl: ENSDARG00000101996
UniProt: Q6PGZ4
Position
8:7854162..7873041
AA seq 570 aa
MDSEVSDFEQPPGPERTLIRGNAPVYCVCRRPDINCFMIGCDSCSEWFHGDCIKISEKTA
KTIRVWYCEKCRSKDETLEVKYRPKKSREKEAETDGPDTQPDTPDFKSDGRRGSRIKRSA
RMCGECEACLRTEDCGLCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRVKEEEYSMS
KSRDYQDGPLSEEYSENELELYQQYCAGQYGDNGTGWNSDDDDGSYGESSLRKKAVKVKH
VKRREKRSEKSEKKKEENKSRKHKPKQKHRDRVRHSERAEVRDSGGARQCLGPGCVEAAR
ANSKYCSDDCGMKLAANRICEILPQRIQQWQQSPCIAEEQGKKFLERIRREQQLARMRLT
EMEKRFHELEGIIAKAKQQVVQYDEEVNEGDDDTDLQIFCVSCSHSVNPKVALRHMERCY
AKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPKIPADEVCGC
PLVRDVFEPTGEYCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFEQERNVKTAM
TNRAGLMALMPHQTIQHDPITTDLRTSKDR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggacagtgaagtgtcagactttgaacagcctcccggaccagagaggactctgattcgg
ggcaatgctccggtgtattgtgtttgtcgcagaccagacatcaactgcttcatgattggt
tgtgacagctgcagcgaatggtttcatggagactgcattaaaatatcagagaagacggcc
aaaaccatccgcgtgtggtactgtgaaaagtgcagaagtaaagacgaaaccttagaagtc
aaataccgccccaagaaaagcagagagaaggaagccgagacagacgggcctgatacccag
cctgacacaccagattttaagtcagacggacggcgtgggtcacgaattaagcgctctgct
cgcatgtgtggagaatgtgaagcctgtttgcgcacagaggactgcgggctgtgtgacttc
tgcaaagacatgaagaagtttggaggcccgaataagatcagacagaagtgtcgactgagg
cagtgtgaagtgcgcgctaggaaaatgttgcgagtgaaggaagaggagtactccatgtct
aagagcagagactatcaggacggcccactgtctgaagagtacagtgagaatgagctggag
ctgtatcagcagtactgcgcgggacagtatggagataacggcacgggttggaatagtgat
gacgacgatggttcatatggagaatcgtctctgagaaagaaagctgttaaggtcaaacac
gtgaaaagaagagaaaagcgatctgaaaaatctgaaaaaaagaaagaggagaataaatct
cggaagcacaagcccaagcagaagcaccgtgaccgggtgagacacagcgagcgggcagaa
gttcgagacagcggaggagccagacagtgcctcggacccggctgtgtggaagctgcacgc
gcaaactccaaatactgctctgacgactgcgggatgaagctcgctgcaaatcgaatctgt
gagattttgccccagcggatccagcagtggcagcagagcccgtgcattgcagaagagcag
ggcaagaagtttctggagcgaatccgccgtgagcagcagttggctcgcatgagactaact
gagatggagaaacgctttcatgagctggagggcattatcgctaaagccaaacagcaggtc
gtgcagtacgatgaagaggtcaacgagggcgatgatgacaccgatttgcaaatcttctgt
gtgtcctgcagtcattcagttaaccccaaagtggcgctacgtcatatggaaaggtgctat
gccaagtatgagagtcagacatcctttggctccatgtatcccacacgcatagagggtgct
acacggctcttctgtgatgtttacaatccacaaagtaagacatactgtaaaagactgcag
gtcctctgtccggagcactccagagaccccaagattcctgcggatgaggtctgtgggtgt
ccactggttcgagatgtgttcgaacccaccggtgaatactgtagagtgtccaaacggaag
tgtaataaacactactgctgggagaaactccgcagggctgaagtcgacctggaacgagtg
cgagtgtggtacaagttggatgagttgtttgagcaggagcgcaacgtgaaaacagccatg
acgaatcgcgcaggcctaatggcgctcatgccgcaccagacaattcaacacgacccaatt
accactgacctgagaaccagcaaagacagataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (44)   

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