KEGG   Danio rerio (zebrafish): 402962
Entry
402962            CDS       T01004                                 
Symbol
lhfpl2a
Name
(RefSeq) LHFPL tetraspan subfamily member 2a protein
  KO
K23893  LHFPL tetraspan subfamily member protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dre02000]
    402962 (lhfpl2a)
   03037 Cilium and associated proteins [BR:dre03037]
    402962 (lhfpl2a)
Transporters [BR:dre02000]
 Other transporters
  Pores ion channels [TC:1]
   402962 (lhfpl2a)
Cilium and associated proteins [BR:dre03037]
 Other cilia and associated proteins
  Stereociliary proteins
   402962 (lhfpl2a)
SSDB
Motif
Pfam: L_HMGIC_fpl Claudin_2 PMP22_Claudin
Other DBs
NCBI-GeneID: 402962
NCBI-ProteinID: NP_991226
ZFIN: ZDB-GENE-040426-1839
Ensembl: ENSDARG00000009653
UniProt: Q6P0C6 A0A8M9P387
Position
21:complement(301002..327077)
AA seq 225 aa
MCHVIVTCRSMLWTLLSIVAAFSELIAFLSTDWLVGFPRAPDAGFSPLGATAAGEAYRPT
LGIYGRCIRVPHYRRGVLCGPYAVHFGEIASGFWQATAIFLAAGILLLCAVAFISIFTMC
FQSIMKKSIFNVCGLLQAIAGLFLIVGLVLYPAGWGSQKVQLYCGPDSSPYRLGLCSAGW
AFYTALAGTVLCFLCAVFSAQAEIATSSDKVQEEIQEGKSLICLL
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtgtcatgtgatcgtgacgtgccgctccatgctgtggactctgctcagcatcgtggcg
gcgttcagtgagctcatcgctttcctgagcactgattggctggtgggattcccgcgggcg
ccggacgccggtttctctccgctcggggccacggcggcgggtgaggcttacagacccacg
ctgggcatctacgggcgctgcatccgcgtgccgcactatcggcgtggtgtcctgtgcggc
ccgtacgccgtgcacttcggagagatcgccagcgggttctggcaggccaccgccatcttc
ctggcggccgggattctgctgctgtgcgccgtggccttcatctccatcttcaccatgtgc
ttccagagcatcatgaagaagagcatcttcaacgtctgcggactcctgcaggccatcgca
ggtctgttcctgatcgtggggctggtgctgtacccggcaggttggggttctcagaaggtg
cagctgtactgcgggccggactcgtccccgtaccgtctgggcctgtgctctgccggctgg
gctttctacacggctctggccgggacggtgctctgcttcctctgcgccgtgttctccgct
caggccgagatcgccacgtccagcgataaagtgcaggaggagatccaggagggcaagagt
ctgatctgcctgctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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