KEGG   Danio rerio (zebrafish): 404604
Entry
404604            CDS       T01004                                 
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform 2
  KO
K16578  CLIP-associating protein 1/2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    404604 (clasp2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    404604 (clasp2)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Microtubule-associated proteins
     404604 (clasp2)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Cytoplasmic linker proteins (CLIPs)
     CLIP-associating proteins
      404604 (clasp2)
SSDB
Motif
Pfam: CLASP_N CEP104-like_TOG HEAT HEAT_EZ MMS19_C HEAT_2 ParcG Cnd1 IFRD TAN UTP20_C
Other DBs
NCBI-GeneID: 404604
NCBI-ProteinID: NP_996955
ZFIN: ZDB-GENE-040426-2343
Ensembl: ENSDARG00000020345
UniProt: Q6NYW6
Position
19:42693558..42802301
AA seq 1288 aa
MALSLSQDRSFDDDDSVDGSRPSSAQAAFKVPKVPKKPAESASSSRRPSATGAAKSGASK
EGAGAVDEEDFIKAFTDVPTVQIYSTRDLEDNLNKIREVLSDDKHDWDHRANALKKIRSL
LVAGATDYDCFYQHLRLLDGAFKLSAKDLRSQVVREACITVAYLSTLLGNKFDHGAEGIV
PVLFNLIPNCAKVMATSGTAAIRIIIRHTHVPRLIPLIASNCTSKSVAVRRRCYEFLDLL
LQEWQTHSLERHAAVLVESIKKGIRDADAEARVEARKAYWGLRAHFPGEAESLYNSLESS
YQRTLQSCLKSSGSVASLPQSDRSSSSSQESLNRPLSKWSAAPGRVPAGSKSSGSPASLQ
RSRSDVDVNAAAGAKARHSGQAGGAGRVTTGLTPGSYASLGRLRTKQTLSTASSVGSSQV
DSRGRTRSKMASQSQRSDDSDCTPGSQSATPVGAGSRSGSPGRVLASTALSTLSTGAQRV
SAAPGSHRRSRIPRSQGCSRDSSPTRLSVAPSNISHIYNGSKGARGSRIPRPSVSQGCSR
EASRESSRDTSPVRSFTPLGSGLGMSQSSRLSSSVSAMRVLNTGSDVEEALADALKKPAR
RRYDTYGMYSDDDANSDASSACSERSYSSRNGSIPTYMRQTEDVAEVLNRCASANWSERK
EGLMGLQALLKNHRTLSRVELKRLCEIFTRMFADPHSKRDPRGFGTVESGISSASFKRVF
SMFLETLVDFIAVHKEDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPNDL
QFTILMRFTVDQTQTPNLKVKVAILKYIETLTLQMEPQDFVNTGETRLAVSRIITWTTEP
KSSDVRKAAQSVLISLFQLNTPEFTMLLGALPKTFQDGATKLLQNHLRNTGNTAQASIGS
PLTRHTPRSPASWSSPLTSPTNTSQNTPSPSAFDYDTENMNSEEIYSSLRGVSQAIQNFS
VRSQEDMTEPPRKREGDGGEETVDSGRTALDNKTSLLNTMPLLSSSPRPSRDYQPVNYSD
SSFGSSSFNKSLKDADQEESLTDDSGVDQSEVVAELLKELSNHSERVEERKAALCELMRL
IRETQLHVWDEHFKTILLLLLETLGDGEHVIRALALRVLKEILNRQPWRFKNYAELTIMK
ALEAHKDPHKEVVRAAEEAASMLATSISPDQCIKVLCPIIQSADYPINLAAIKMLTKVID
RLPKEGLIQMLPEIVPGLIQGYDNSESSVRKACVFCLVAIYAVIGEDLKPHLSQLSGSKL
KLLNLYIKRAQSGSSGSDQSSDVGGQGL
NT seq 3867 nt   +upstreamnt  +downstreamnt
atggctctcagcctgagtcaagaccgtagtttcgacgatgacgactctgtggatggaagc
aggccgtcatcggctcaggcggcttttaaagtgcccaaagtacccaagaaacctgcagaa
tctgccagcagttccagacgacccagtgccactggagctgccaaatcaggagcttctaaa
gagggtgcaggagccgtggatgaggaggatttcatcaaagcattcacagacgtgcccaca
gttcaaatctactccacacgggacctggaggataacctgaacaagatccgcgaggttctg
tctgacgataaacacgactgggaccacagagcaaacgcgctgaagaaaatccgatctctg
ctggttgccggagcaacagactatgattgtttctaccagcacctgcgcctgttggatggc
gccttcaagttgtcggctaaagacctgcgttcccaggtggtgcgggaggcttgcatcaca
gtggcgtatctttccacgttattggggaataagtttgaccacggagccgagggcatcgtt
ccagtgcttttcaacctcatcccgaactgtgccaaagtgatggccacatctggcacagca
gccattcgcatcatcatacggcacactcatgtcccgcgtctaattcctctcatcgctagt
aactgcacatcgaaatctgtggccgtccggaggcgctgttatgagttcttggatcttctg
ctgcaggaatggcagactcactctctagagaggcatgcggctgtgctggtggagagtatt
aagaagggaatcagagatgccgacgcagaggctcgagtggaggccaggaaggcgtactgg
gggttgcgggctcatttccccggggaggcggagtctctgtataactcattagaatcgtcc
tatcagaggacacttcagtcgtgtttaaagagctcgggcagcgtggcgtcactcccacag
tcagaccgctcgtcctccagctcgcaagaaagccttaatcggccgctgtcaaagtggtca
gctgctcctggcagagttcctgcgggctcaaaatcttctggatctccagcctcgctgcag
cgctcccgcagtgatgtggatgtcaacgctgccgccggtgctaaagccagacacagtggc
caggctggaggagccggcagagtcaccacaggcctgacccctggatcatacgcttctctc
gggcggctacggactaagcagactttatccacagcttccagtgtgggcagcagtcaggta
gactccagaggccggaccagatccaagatggcgtcccagtcacaacgttccgacgattct
gattgcacgccaggatcacagtctgctacccctgtcggtgcgggttctcggtcaggatcc
ccaggccgggttttggccagcacggctctgagcacgctcagtacaggagctcagcgtgtg
agtgcagctccaggctctcaccgccgcagccgcatcccacgcagtcaaggctgcagtcga
gactccagccccacacgcctgtctgtcgcgccttcaaacatcagccacatctacaacgga
tcaaaaggagcgaggggtagtcgtataccacggcctagtgtgagtcagggctgcagtcgc
gaggccagccgagagagcagcagagacaccagccctgtgcgctccttcacgccgctcggt
tctgggttgggtatgtctcagtccagtcgtctgtcatcttcagttagtgccatgagagtc
ttgaacaccggatctgacgtggaggaagccctggcagatgctctgaagaaacctgctcgg
cggcggtacgacacgtatgggatgtattcagatgatgatgctaatagcgacgcctctagc
gcgtgttctgagcgctcgtacagctccagaaatggcagcatcccaacgtatatgcggcag
acggaggacgtggctgaagtgctcaatcgctgtgcctccgccaactggtccgagaggaaa
gaggggctgatgggattgcaggcgttgctgaaaaaccatcgaactcttagtcgtgttgag
ctgaagaggctgtgtgaaatcttcaccaggatgtttgcagacccacacagcaagcgtgat
cccagaggcttcggcacggtagaatccggtatcagttctgcctcgtttaagagagtgttc
agcatgtttctggagacgctggtggacttcattgctgttcataaagaggatctgcaggac
tggctcttcgtgctcctcacacagctgctgaagaaaatgggagcggatctgctcggctca
gtacaagccaaagtacagaaagccctggacgtcacaagagaatccttccccaatgatctg
cagttcactatcctcatgagattcacagttgaccaaacacagacgccaaacttaaaggtg
aaggtggccattttgaagtacattgaaacactgacactacaaatggagccgcaggatttc
gtcaacacgggtgaaaccagactggcagtgtcgcgtatcattacgtggaccaccgaaccc
aagagctcagatgtcagaaaggcggcgcagtcagtgttgatctcgctgttccagctgaac
acgccggagttcacaatgcttctgggcgcacttcctaaaacctttcaggacggagccact
aaattattgcagaaccacttgcgaaacacaggcaacacagcgcaggcgtcaattggaagc
ccacttacccggcacacaccaagatcaccagccagttggtcgagtcctttaacctctcct
accaacacatcccaaaacacaccttcaccaagtgcatttgattacgatacggagaacatg
aactctgaggagatctacagctctctgagaggagtcagtcaggccatccagaacttcagc
gtccgcagccaggaggacatgacagagcctccacggaaaagagaaggagacggcggagaa
gagactgttgactctggtcggacggcgctggataataagacctctctgctgaacactatg
cccctcctctcctcgagtccccgcccatcaagggattaccagccagtcaattactctgac
tcctccttcggctcctcctcttttaataaaagcctgaaagatgcggaccaagaggagtcc
ctcactgacgacagcggtgtggatcagtctgaggtggtggctgagctcttgaaggagctg
tccaatcacagcgagcgtgtggaggagaggaaagcagcgctgtgtgaactaatgcggctg
atcagagaaacacagctgcatgtttgggacgagcacttcaaaaccatcctcctgctgcta
ctggaaacactcggagatggagagcatgtcattcgggcattagccctgcgggtgctgaag
gaaatcctcaacaggcagccgtggcgctttaaaaactatgcagagctcaccattatgaag
gctctggaggcacataaagacccacacaaagaggtggtgcgggctgcagaagaggcagca
tccatgttggccacctcgataagtcccgatcagtgtataaaagtgttgtgtcccatcatc
cagtcagcggactatcccatcaacctcgctgccattaagatgctcaccaaagtcatcgac
cgtctgcccaaagagggtctcattcagatgctcccagagatcgtccccggcctcattcag
ggttatgataactctgagagcagtgtacgaaaggcctgtgtattttgccttgtggccatc
tatgccgtcattggagaggatctgaaacctcacctcagccagctgtctggcagcaagctg
aaactgttgaatctgtacataaagcgagctcagagcggctccagcggcagtgaccagtct
tcagatgtgggagggcagggcctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (45)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (43)   
DNA sequence (47)   
   RefSeq(nuc) (43)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (141)   

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