KEGG   Danio rerio (zebrafish): 406272
Entry
406272            CDS       T01004                                 
Symbol
sema6d
Name
(RefSeq) semaphorin-6D
  KO
K06842  semaphorin 6
Organism
dre  Danio rerio (zebrafish)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 406272
NCBI-ProteinID: NP_998164
ZFIN: ZDB-GENE-040426-1933
Ensembl: ENSDARG00000002748
UniProt: B8JMB1
Position
19:390297..417381
AA seq 898 aa
MVFEAKRLTERTWCCSVIMAMVLLAWLLPLITSATPFPRDLQPISVVGLDDSYLYPSFQG
LVSSNETERLGLDYQRMMRIQHMLYIAARDHVFVVNLTTAVDEIIPQQILTWRSTDVSKC
TVRGRNSDECYNYIKVLVPRNDETLFACGTNALNPACRNYRLSSLEQVGQELLGQARCPF
ESRQSNVGVFAGGHFYSATVTDFQASDAVIYRSLGGEGRPVLRTVKYDSKWLREPHFLHA
VEYGNYVYFFFSEIAVEHTAAGKVVYSRVARVCKNDNGGSTRVLDRHWTSFLKARLNCSV
PGDTFFYFDVLQSLTNVLQINQRPAVVGVFTTQTNSIPGSAVCGFYLDDIERVFNGRFKE
QKNSDSMWTAVPEEQVPKPRPGSCAGEGSASSYSSSVQFPDSVLSFIKTHPLMEESVPSV
NSQPLITNTASSYKLTQIVVDTAAGPHKNRTVVFLGSEDGRVLKILTNTHTNSSHTSQLL
EDIDVFNPTRCVGERAVLGLELDKEHHALFVAFSSCVIRVPLSRCAQHATCRRRCLYTHD
PYCIWLRTGRCADMAPGFKAGFEQDIDGEQTHLFDTCTDVMSSAGSDVKSAVDSASGVKQ
LPDADSLSDGYHFTLLGACVLLAFVLGAIASGLLVSCYCRQSSPSTPEPEATLAHTHAHT
LSLSSLAKINLLMDNKPEKKSESPSAHIYSPAKPPEELPPTPDSTPELPIKNIKAISSQW
ERSHTHNSTLQLIPTNQSHPMLSENHSDDISSSSQRFDATLMSPAGLKSYNRTLLPKSYY
SCLKEPSECSTLQQIPEQPSAQRHVLIKMGNGITSARQHTFNPKMNSNTGNIYEIQRPLV
AGGSCLTRQHSYSEPPQLQRSAIVRRTASLKPQIPPKPLNIPAKTLPSAGTHNHTHNY
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggtgttcgaagccaaacggttgacggaaagaacatggtgttgctctgtcatcatggcg
atggtcttattagcctggctcctcccactcattacttctgccacgccttttcctagagat
ctgcagccaattagtgtggtgggattggacgactcgtacctgtaccccagttttcagggt
ctggtgtccagcaatgagacggagcgtctgggtctggactatcagcgcatgatgaggatc
cagcacatgctgtacatcgccgccagagaccatgtgtttgttgtaaatctcacaacggca
gtagatgaaattattccacagcagatcctgacgtggagatccacagacgtgtccaagtgc
accgtcagaggaagaaacagtgatgaatgttacaattatatcaaggttcttgttcctcgt
aatgacgagactctgtttgcctgtggaacaaacgcgctgaatcctgcctgccgcaactac
agattgagttcactggagcaggtcggacaggagctcttgggtcaggcaagatgtccattt
gagtctcgacagtccaatgtaggagtgtttgcaggtggtcatttctattcagccacagtg
acggacttccaggcgagtgacgctgtgatctacaggagtttaggaggagagggtcgacct
gttctgcgcactgtcaaatacgactccaaatggctcagagagcctcatttcctgcacgct
gtcgaatacgggaactatgtgtatttcttcttcagtgagattgctgtggagcacactgct
gctgggaaggttgtgtattctcgtgtggcgcgagtgtgtaagaatgataacggcggctcc
acgcgagtgttggaccgacactggacatcatttctgaaggctcggctgaactgctccgtt
cctggagacactttcttctacttcgatgtgcttcagtctctgaccaatgtgctgcagatc
aaccagagacccgctgtagtcggagtgttcaccacacagaccaacagtattccgggatcc
gctgtttgcggtttctatctggatgacattgagcgagtgtttaatgggaggtttaaagag
cagaagaacagtgactccatgtggacggcagtaccggaggaacaggtgcccaaaccacgt
ccaggttcgtgtgcaggtgagggttctgcctcctcctattcctcttctgttcagtttcca
gactctgtgctgtcgttcatcaaaacacacccgctgatggaggagagcgtgccgtcagtc
aacagccaaccgctgatcaccaacaccgccagcagttataagctgactcagattgtggtg
gacactgctgctgggcctcataagaaccgcaccgtagtgtttctgggctctgaagacgga
cgcgtgctgaagatcctgaccaacacacacaccaacagctcacacacatcccagctgctg
gaggacatcgacgtgtttaatcctacacggtgtgttggtgagcgtgcagtgttgggtctg
gagctggataaggagcatcacgctctgtttgtggccttctccagctgtgtgatcagagtt
cctctcagccgctgcgctcagcacgccacctgcaggagacgctgcctctacacacatgac
ccatactgcatctggctgcggacgggacgctgtgctgacatggccccggggttcaaggcg
ggatttgaacaggacattgatggtgaacaaactcatttatttgacacatgcactgatgtg
atgtcatcagcaggaagtgatgtcaaatcagctgtggattcggcctctggagtgaagcag
cttcccgacgccgacagtctgagcgacggctatcacttcactcttctgggcgcgtgtgtg
ttgctagcgtttgtgttgggggcgatcgcgtcaggtttgctggtgtcgtgttactgcaga
cagagctctccgtcaacgccagagcctgaagcaacactcgcacacacacatgcacacaca
ctctcgctcagcagcctcgctaagatcaacctgctgatggacaacaaaccagagaaaaag
agcgagtctccatccgcacacatctactcgcccgctaaacctccagaagagctgccaccc
acgcccgactcgaccccagaactgccaatcaaaaacatcaaagccatcagcagccaatgg
gagagaagccacacccacaactccaccctccagctcattccgaccaatcagagtcatcca
atgctttcagaaaatcacagtgatgatataagcagtagcagtcagcgttttgatgccacc
cttatgtcacctgctggattaaagtcatacaatcggactttattacccaagtcgtattac
agctgtctgaaagagccgtcagaatgttccacgcttcagcagattcccgaacagccctcc
gcacagcgccacgtcctcattaaaatgggtaacgggatcaccagcgcgcgccagcacacc
ttcaaccccaagatgaactccaatacggggaatatttacgagatccagcggccgctcgtc
gccggcggctcgtgtttgacgcggcagcacagttacagcgagccgccacagctccagcgc
agcgctatcgtcagacgcaccgcatcgctaaaaccacagataccgcccaaaccactgaac
atacctgctaaaacactgccctctgctggcacacacaaccacacacacaactactga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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