KEGG   Danio rerio (zebrafish): 406816
Entry
406816            CDS       T01004                                 
Symbol
cul1b
Name
(RefSeq) cullin-1b
  KO
K03347  cullin 1
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04110  Cell cycle
dre04114  Oocyte meiosis
dre04120  Ubiquitin mediated proteolysis
dre04141  Protein processing in endoplasmic reticulum
dre04310  Wnt signaling pathway
dre04340  Hedgehog signaling pathway
dre04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    406816 (cul1b)
   04120 Ubiquitin mediated proteolysis
    406816 (cul1b)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    406816 (cul1b)
   04340 Hedgehog signaling pathway
    406816 (cul1b)
   04350 TGF-beta signaling pathway
    406816 (cul1b)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    406816 (cul1b)
   04114 Oocyte meiosis
    406816 (cul1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    406816 (cul1b)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Cullin
     406816 (cul1b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 406816
NCBI-ProteinID: NP_998660
ZFIN: ZDB-GENE-040426-2887
Ensembl: ENSDARG00000007691
UniProt: Q802D4
Position
24:complement(17364588..17400217)
AA seq 774 aa
MSSTRGQNTHGLKQIGLEQIWDDLRSGIQQVYTRQSMARSRYMELYTHVYNYCTSVHQAR
PTGIPSSKPSKKTPTPGGAQFVGLELYKRLKDFLRSYLTNLLKDGEDLMDESVLKFYTQQ
WEDYRFSSKVLDGICAYLNRHWVRRECDEGRKGIYEIYSLALATWRECLFRPLNKQVTNA
VLKLVEKERNGETINTRLVSGVVQSYVELGLNEDDAFVKGPTLSVYKEYFEAQFLADTER
FYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHLEI
FHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLESHIHNQGLAAIEKCGDSALND
PKMYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSPELL
ARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSASD
DAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLSNSEPLDLDFSIQVLSS
GSWPFQQSCTFALPSELERSYQRFTAFYGSRHSGRKLTWLYHLSKGELVTNCFKNRYTLQ
ASTFQMAILLQFNTENCYSVQQLADSTQIKTDILVQVLQILLKSKLLVLEDENANIDEMD
FKPDTLIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMR
KVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgtcatccaccaggggccagaacacccacgggctcaaacagattgggctggagcagatc
tgggatgacctgagatcaggaatacagcaagtctatacacgccagagcatggctaggtct
cgctacatggaactctacacacatgtgtataactactgtaccagtgtacaccaggccagg
cctactggcatcccctcgtccaaaccctccaagaaaacacccacacctgggggggcacag
tttgttggactagaactctacaaaagactcaaagattttctgaggagctacttgacaaac
cttctcaaggatggagaggacctgatggatgagagcgtgctaaagttctacacacagcag
tgggaggattatcgcttctccagtaaagtgttagatgggatctgtgcttacctcaacaga
cactgggtgcgtcgggagtgtgatgagggacggaaaggaatttatgaaatctactcgctt
gctttggccacttggagagaatgtttattcagacctctaaacaagcaggtaaccaatgca
gttttaaagcttgttgagaaggagagaaatggtgagactattaacaccagactcgtcagt
ggagttgttcagtcctatgttgagttgggcttgaatgaggacgatgcatttgtgaagggc
ccgacattatcagtttacaaggagtacttcgaggcccagtttttagcagacaccgaacgt
ttctatacacgagaaagcacagagttcctccaacaaaaccctgttacggaatacatgaaa
aaggcagaggcacgattgctggaggagcagcggcgggttcaggtttatctccacgagagc
acacaagacgagctggctcgcaagtgtgagcaggtcctcatcgagaaacacctggagatc
ttccacacagagttccagaatcttctagatgctgataagaatgaagatctcggtcggatg
tacaaccttgtttcccggatcacagatggattgggagagctaaagaaactcttggagtcc
cacattcataatcagggtctggcagccatcgagaagtgtggagattcagcgctcaatgat
cctaaaatgtatgtgcaaactaccttggatgttcacaagaaatacaatgctcttgtcatg
tctgcgttcaataatgatgccgggttcgtggcggcactggataaggcctgtggaagattc
attaataataatgcagtaacaagaatggcacagtcctccagcaaatcccctgagcttctg
gccagatactgtgactccttactgaagaagagttcaaagaacccagaggaggctgaactt
gaagatactctcaaccaagtgatggtggttttcaagtatatcgaggataaagacgtgttc
cagaagttctacgccaagatgctggccaaaagactggtgcaccagaacagtgccagcgac
gacgccgaggccagcatgatctccaaactcaagcaagcgtgtgggttcgagtacacctcc
aaactccagcgcatgttccaggacatcggcgtcagtaaagacttgaacgaacaattcaaa
aagcacctttccaactctgagcctctggacttggatttcagcatccaggttttgagctcc
ggctcgtggccgttccagcagtcttgcacattcgctttaccatctgagttggagcgcagt
taccaaagatttacagctttttatggaagcagacacagcggacgcaagttaacatggctt
taccatctatccaaaggagagctggtcaccaactgcttcaagaacagatacactctgcag
gcctccaccttccagatggccatcctgctgcagttcaacaccgagaactgctactccgtc
cagcagctcgccgacagcacacagatcaaaaccgatattttagttcaggtcttgcaaatc
ctgttgaaatcaaagttgctagtcttggaggatgagaatgcaaacattgacgaaatggat
ttcaagcctgatacattaataaaactgttcttgggctataagaataagaagttacgggtg
aatatcaatgtgccaatgaagacagagcaaaagcaagagcaggaaacaacacacaagaac
atcgaggaggaccgaaagcttctgatacaggcagctattgtgaggatcatgaagatgagg
aaggttttaaaacaccagcagcttttggcagaagtgctgaaccagctttcttcacgattc
aaacctcgtgtacctgtcatcaagaaatgcattgacattttgatagagaaggaatacctg
gaacgtgtagatggggaaaaagacacgtacagttacctggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (7)   
   KEGG PATHWAY (7)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (53)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (82)   

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