KEGG   Danio rerio (zebrafish): 445397
Entry
445397            CDS       T01004                                 
Symbol
chmp6b
Name
(RefSeq) charged multivesicular body protein 6
  KO
K12195  charged multivesicular body protein 6
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
dre04144  Endocytosis
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    445397 (chmp6b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    445397 (chmp6b)
  09143 Cell growth and death
   04217 Necroptosis
    445397 (chmp6b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    445397 (chmp6b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    445397 (chmp6b)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    445397 (chmp6b)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   445397 (chmp6b)
  Exosomal proteins of other body fluids (saliva and urine)
   445397 (chmp6b)
SSDB
Motif
Pfam: Snf7 DUF4428
Other DBs
NCBI-GeneID: 445397
NCBI-ProteinID: NP_001003874
ZFIN: ZDB-GENE-040924-2
Ensembl: ENSDARG00000102024
UniProt: Q503V0
Position
12:35588064..35594862
AA seq 206 aa
MGNLFGKKKATRVTEQDRAVLQLKQQRDKLKQYQKRITLQMDKERQLAKQLLKDGKKDKA
LLLLKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSI
EEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITHGEADLELPEVPGEEL
PEVPEQEPVREKERVKKKPEREMVAV
NT seq 621 nt   +upstreamnt  +downstreamnt
atgggaaatcttttcgggaaaaagaaagcaactcgggtgaccgagcaagacagagctgtg
ctgcaactgaaacagcagagagataaactgaagcagtatcagaagaggatcacgcttcag
atggacaaggagcgacaactggccaaacagttactgaaagatggcaagaaagataaagca
ctcctactcctgaagaagaaacgctaccaggatcagttactggaaaagacagaaaatcaa
attagtaacctggagcgaatggtacaagatattgaatttgcacaaatagagatgaaagtt
attgaaggattgaaagttggcaatgattgcctaaagaaaatgcatgaggtgctgtctata
gaggaggtggagaaaatcatggatgaaacacatgatgccattgagtatcagaagcaaatt
gatgagatgctggcaggatctctgacccaggaggatgaggaggctgtgctagcagagctg
gaggccatcactcatggagaagctgaccttgaacttcctgaggtgcctggagaagagcta
ccagaggttccagagcaagagccagtgcgggagaaggagagggtgaaaaagaagccagag
cgtgagatggtggcagtgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (42)   

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