KEGG   Danio rerio (zebrafish): 492511
Entry
492511            CDS       T01004                                 
Symbol
snrpa1
Name
(RefSeq) U2 small nuclear ribonucleoprotein A'
  KO
K11092  U2 small nuclear ribonucleoprotein A'
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    492511 (snrpa1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    492511 (snrpa1)
Spliceosome [BR:dre03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    492511 (snrpa1)
 Complex B
    492511 (snrpa1)
 Complex C
   U2 SnRNP specific factors
    492511 (snrpa1)
SSDB
Motif
Pfam: LRR_9 DHU1_N LRR_8 LRR_4
Other DBs
NCBI-GeneID: 492511
NCBI-ProteinID: NP_001007384
ZFIN: ZDB-GENE-041114-82
Ensembl: ENSDARG00000024651
UniProt: F1R300
Position
7:9290934..9305587
AA seq 277 aa
MVKLTAELIEQAAQYTNPVRDRELDLRGYKIPVLENLGATLDQFDTIDLSDNEVRKLDGF
PLLKRLKTLLVNNNRICRIGENLEQALPDLKELILTSNNIQELGDLDPLATVKSLSLLSL
LRNPVTNKKHYRLYVINKIPQIRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIAKQSKT
FTPGAGLQTEKKTGPSAAEVEAIKNAIANATSLAEVERLKGLLQAGQIPGRDLRSGAGNM
VEEEEEEEMSESVPMFEDMQGENNDEDMQEEMHVNGS
NT seq 834 nt   +upstreamnt  +downstreamnt
atggtgaagctgacggcggagttgatcgagcaggcggcgcagtacacgaaccctgtgcgg
gacagagagctggatctgcgcggctataaaatccctgtgctagagaatctgggcgccact
ctggatcagtttgataccatcgatctgtcggataatgaggtcagaaaactggatgggttt
ccgctgctgaagagactcaaaacgctgctggtgaacaacaacagaatctgccgaattgga
gagaacttggagcaggctttaccagacctgaaggagctcattctcacaagcaacaacatt
caagagctgggtgatttggatcctcttgccacagtaaaatctttgagtctgctcagtctc
ctcaggaatccagttaccaacaagaaacattacagattatatgtcatcaataaaattcca
cagatccgagttctggacttccagaaggtcaaactgaaggaacgtcaggaggcggaaaaa
atgttcaaaggcaaacgcggtgctcagcttgcaaaggatattgccaagcaatccaaaacg
ttcactcctggagctggactgcaaaccgagaagaaaacaggcccgtctgctgccgaggtt
gaagccatcaagaatgctatcgctaatgctacgtcactggctgaagtggagcggctgaag
ggactcctgcaggctggacagattccaggacgagacctcagatcaggagcagggaacatg
gtggaggaggaagaagaggaggagatgtctgagtctgtgcccatgtttgaggacatgcag
ggagaaaacaatgatgaagacatgcaggaggaaatgcatgtgaatggatcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (10)   
   RefSeq(nuc) (2)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (35)   

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