KEGG   Danio rerio (zebrafish): 494110
Entry
494110            CDS       T01004                                 
Symbol
lhfpl6
Name
(RefSeq) LHFPL tetraspan subfamily member 6 protein precursor
  KO
K23893  LHFPL tetraspan subfamily member protein
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dre02000]
    494110 (lhfpl6)
   03037 Cilium and associated proteins [BR:dre03037]
    494110 (lhfpl6)
Transporters [BR:dre02000]
 Other transporters
  Pores ion channels [TC:1]
   494110 (lhfpl6)
Cilium and associated proteins [BR:dre03037]
 Other cilia and associated proteins
  Stereociliary proteins
   494110 (lhfpl6)
SSDB
Motif
Pfam: L_HMGIC_fpl UPF0016 Claudin_2
Other DBs
NCBI-GeneID: 494110
NCBI-ProteinID: NP_001008653
ZFIN: ZDB-GENE-041212-82
Ensembl: ENSDARG00000004363
UniProt: Q5PRC1 B2GTL3
Position
10:31951338..32038263
AA seq 200 aa
MASSLTCAGVIWALLSFLCAATSCVGFFMPYWLLGSQMGKPVSFGTFRRCSYPIRDEARG
GTVMLEQCGRYASFQGIPSLEWRICTVVTGIGCGLLLLVALTAIMGCCVTDLISRTIGRV
AGGIQFVGGLLIGSGCALYPLGWDSEEVRQTCSNSSDQFDLGSCEIGWAYYCTGAGAAAA
MVLCTWMACFAGKKQKHYPY
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcatccagccttacatgtgcaggtgtgatttgggccctgttgtcgtttctttgtgct
gctacatcttgtgttggcttcttcatgccatactggctgcttgggtcacagatgggtaag
ccagtgtcatttgggacttttcgccgctgttcataccccataagggatgaggcccgtggt
gggactgttatgttggagcagtgtgggcgatacgcctcctttcagggcatcccaagtctg
gagtggagaatctgcacggtggtgacagggattggatgtggactgctgctcctggttgct
ctcacggcaataatgggatgctgtgttacggatctaatctctcgcaccataggacgagtg
gcaggagggatacagtttgttggagggctgctgatcgggtctggatgtgccctgtaccct
ttaggctgggacagtgaagaagtcagacagacttgcagcaacagttctgaccagtttgat
cttggttcttgtgagatcggatgggcttattactgcaccggggctggagcagcggcggcc
atggttttgtgcacgtggatggcgtgtttcgcagggaagaagcagaaacactatccttac
taa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

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