KEGG   Danio rerio (zebrafish): 541533
Entry
541533            CDS       T01004                                 
Symbol
scrt1b
Name
(RefSeq) transcriptional repressor scratch 1b
  KO
K09219  scratch
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    541533 (scrt1b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    541533 (scrt1b)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_6 zf-C2H2_jaz zf-met zf-BED Rpr2 zf-C2HC_2 zf-C2H2_11 HypA zf-C2HE
Other DBs
NCBI-GeneID: 541533
NCBI-ProteinID: NP_001014369
ZFIN: ZDB-GENE-050327-72
Ensembl: ENSDARG00000040214
UniProt: Q58EN9
Position
16:complement(31186083..31188715)
AA seq 279 aa
MPRSFLVKKVKLDDFSSSELESAYGRSRTDLSFRIHDKGYISDYITPAIYDGESDGGTKV
PSPGPIYDSNHSDYGAPDSDQPDSPQSEITSGYINGDNAVSEGYTVDAFFITDGRSRRKV
ISGSRTLQRHTCNECGKTYATSSNLSRHKQTHRSLDSKMAKKCPTCGKVYVSMPAMAMHL
LTHDLKHKCDICGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAF
KHFKCKRCNKTFVLKSYLNKHYESACFKGAFSPHSSIEA
NT seq 840 nt   +upstreamnt  +downstreamnt
atgccaaggtcttttttggtgaaaaaggtgaagctagatgatttctcatcctctgaactt
gagagcgcgtacggcaggtccaggaccgatctcagctttcggattcacgacaaaggctac
atcagtgactacatcaccccggccatttatgatggagagagtgacggaggcactaaagta
ccttctccaggacccatttacgacagcaaccacagtgactacggggcacctgactcagac
caacccgacagcccgcagtcagagatcacatccgggtacatcaatggcgacaatgcggtg
agcgagggttacaccgtagatgccttcttcatcacagacggcaggtcccgtcggaaagtg
ataagtggctcgcggaccctccagcggcacacgtgcaacgaatgtggcaaaacctacgcg
acgtcttccaacctgagcaggcacaaacagacacatcggagcttagacagcaagatggcc
aaaaagtgcccaacatgtgggaaggtgtacgtgtccatgccagccatggccatgcacctg
ctcacccatgacctcaagcacaagtgcgacatatgtgggaaggcattcagcagaccttgg
ctcctgcagggccacatgcgctctcacacgggcgagaagccctttggatgtgcacactgt
ggaaaagccttcgccgaccgctccaacctgcgggcacacatgcagacccactcggcgttt
aagcatttcaaatgcaagcgatgcaacaaaactttcgtactcaagtcctacctgaacaag
cactacgagtctgcgtgctttaaaggtgcgttctcacctcactcgtccattgaggcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (34)   

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