KEGG   Danio rerio (zebrafish): 548610
Entry
548610            CDS       T01004                                 
Symbol
gli2b
Name
(RefSeq) zinc finger protein GLI2b
  KO
K16798  zinc finger protein GLI2
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    548610 (gli2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    548610 (gli2b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 GLI-like
    548610 (gli2b)
SSDB
Motif
Pfam: zf-C2H2 zf-H2C2_2 FOXP-CC Zap1_zf1 zf-C2H2_4
Other DBs
NCBI-GeneID: 548610
NCBI-ProteinID: NP_001015069
ZFIN: ZDB-GENE-050523-1
Ensembl: ENSDARG00000020884
UniProt: Q5BN24
Position
11:43550194..43713750
AA seq 1363 aa
MEAGVPAPAEKKDCKSSPLEGNVFSEMPKKPSPSSLSRGPHHIFPTFHSPIPIDVRHHEG
RYHYDPHALHALHGPPGLAGSPVISDISLIRLSPGAAGEAFLPPHSYVSPHVEHYLRSAH
SSPTLSMISAARGLSPAEVAHEHLKERGLFGLPPPPGASPADYYHLMAGHRNPYGELLMQ
GAGAAAAAAHLPEYFTSVDVSRFPSPRMTPRLSRKRALSISPLSDASIDLQTMIRTSPNS
LVAYINNSRSSSAASSSYGHLSVGGISPSFPFPHSINPVAYQQLLTQQRGLSAFGHTPPL
IQPSPTFSSRHPLSLSTLPTPTTNDTETKNSNGESAVSSTVNPLGNKRSKVKTELGGPRP
VSPYSPEHLSSAQDLKEDMDDCKQEAELVYETNCHWEGCSKEYDTQEQLVHHINNEHIHG
EKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLR
SHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHV
KTVHGPEAHVTKKQRGDLPSRPHPPKENGENEAGAKMAEEKIEANSTTRGVEDYLQVKSI
KTENSMMYQSSPGGQSSCSSEPSPLGSASLHGGGVEPAGLSGGSVGDLSALDDVPIVDST
VSTGILGLHLRKNAGPAHRLTHLKQEKLKSVRDSCSWANTAPPAPCTKLPPINTGSLLDG
LCDPGLSISSPRLGDLCPGETTVLSQLVERRDSLASTVSSAYTFSRRSSGISPCYSSRRS
SQTSQPGGRHNNISSADSYDPISTDLSRRSSEASLYGGIFSLTPAQHYRLKAKYAAATGG
APPTPLPNIDCKTLLGDSHEIPIHPPLVPRRCSDTGYANRSVLPHEVTANITRRASDPVR
RIAAERHSLYNSVNPYPTLHPLASSRHFYSTSESNVNRQQYPPRAPSISENVMMETLPDD
MESCNGVEDGLMMADDAVQCITTQNADSPQHTGVAHRNQSFGSPQHCHLQRRLALVEGNM
NAVARQTASSQQTFPGSANATKIPMPVQWNEVSSGTVDSSRSQTKQGSGRGNLQQKQNLS
SFLNVNSNQQVGLMSHNLALSPVQRSVEFNSLRINQRQANAEFLHGYLQGSASNDISLGL
LNPSGKSLTVQPGGVQNNRVCAQAQSHATFPNNQGNYSQMSSNQQGYIVASQNVNGNLLL
QPRPPTEPKPYSTQHSGPTTTAAQSNFSPAYDTSEASPKKSSSMFYTGQIHMFDSSGAMP
CPSSVGSPETNQVSSTVDSSGADPPQIDFDAMLDDGDHSSLMSGTLSPALLRSLSQNSSR
LTTPRNSVTLPPVAAGISNMAIGDMSSMLTALAEESKFLNMMS
NT seq 4092 nt   +upstreamnt  +downstreamnt
atggaggccggtgttccagctcccgcagagaagaaggactgtaaatcttctcctctggaa
ggaaacgtcttcagcgaaatgcccaaaaaaccttctccttcatccctgagcagagggcct
catcacatcttcccgactttccattctccgattcccatcgacgtgcgtcaccatgagggg
agataccactacgatccccacgcgcttcacgctttgcacggtcctccaggtttagcgggc
agtccagtgatctccgacatctctctgatccgtctgtctccgggagccgccggcgaggct
tttctccctccgcactcatacgtctctccgcatgtcgagcattacctgcgatcggctcac
agcagcccaacgctgtccatgatctcagcggcccgcgggctcagtccagcagaagtggcc
cacgagcacctgaaggagcgagggttgtttggtcttcctcctcctcctggtgcgtctcca
gcggattattaccacctgatggccggccatcggaacccgtatggagaactactgatgcag
ggagctggagccgcagcggccgccgctcacctgccagaatacttcacatcagtggacgtg
tcccggtttcccagtcctcgtatgacgcccaggttgagccgtaagcgagcgctgtccatc
tctccgctctcagacgccagcattgacttgcagaccatgatccgaacgtcccccaactct
ctggtggcctacatcaacaactcacgctccagttcggccgccagcagctcctatggacac
ctgtcagtcggaggaatcagcccttcgttcccgttcccacactccattaatccagtggcg
tatcagcagctgttgacccagcagcgaggcctcagtgcgttcggacacacgccgccgctt
attcagccatcaccaacattctccagcagacacccgctgagtctgtccactctgcccacg
ccaaccaccaatgacacggagaccaagaactcaaatggagagtctgcggtcagcagcaca
gtcaacccactcggcaacaagaggtcaaaggtcaagacggagttgggcgggccgcgacct
gtgtcaccctactcaccggagcacctgagcagtgcacaggacctgaaggaggacatggac
gactgtaagcaggaggcggagcttgtgtacgagaccaactgccactgggagggctgcagc
aaagagtacgacacgcaggagcagctggtgcatcacatcaacaatgagcacatccacggg
gagaagaaggagtttgtgtgccgctgggacgagtgctcacgcgagcagaagcccttcaaa
gcgcagtacatgctggtggtccacatgcgcagacacaccggggagaaaccgcacaaatgc
acgttcgagggctgctcaaaggcgtattctcgtctggagaacctgaagactcacctgcgt
tcacacactggagagaaaccgtacgtctgtgaacacgagggctgcaacaaggccttctcc
aacgcctccgaccgagccaaacaccagaaccgcacacactccaacgagaaaccctacgtg
tgtaagatcccgggctgtaccaagcgctatactgatcccagttcgcttcggaaacacgtt
aaaaccgtgcacgggcccgaagcacacgtcaccaagaaacaacgcggagatctgccgtcc
agaccacatccgccgaaggagaacggagaaaatgaagccggagccaagatggcggaggag
aaaattgaagccaacagcactactagaggagtggaggactacctgcaggtcaagtctatc
aagactgagaactcaatgatgtatcagtccagccctggtggtcagtcatcatgcagcagc
gagccgtcaccgcttggcagtgccagcctccatggcggtggagtagagccggcgggactc
agcgggggcagcgtgggagatctgagtgccctggatgacgtgcccattgtggattccacc
gtctccacaggaatcctgggccttcatttgcgcaagaacgccggcccggcccacagactc
acacacctgaagcaggagaagctgaagtcggtgcgggactcgtgctcctgggcaaacaca
gctcctcctgccccctgcaccaaactaccacccatcaatactggttctttattggacggt
ctgtgtgatccagggctttccatctccagcccgcgtctgggcgacctctgtcctggcgag
actacagtgttaagtcagttggtggagcgtcgggacagcctggccagcactgtgagctct
gcgtacaccttcagccggcgctcatccggaatatcaccatgttattcgagccgtcggtcc
agccaaacatcccaacctggcggccgtcacaacaacatcagctctgctgactcctatgac
cccatttcaaccgatctgtctcgaaggtccagcgaggccagcctatatgggggaatcttc
agcttgactcctgcacaacactaccgacttaaagccaaatatgctgcggccacaggcgga
gcaccacccacgcctctgcctaacatagactgcaagactctgttaggagattcgcatgaa
atccccatacatccccctttggttcccagaaggtgcagtgacaccggctatgccaaccgt
agcgttttaccccatgaggtgacagcaaacattactcgaagagcaagcgacccagttaga
cgaatagctgctgagcggcattcgctctacaacagtgtaaacccgtatccaacattacac
cctcttgcgtcaagccgacacttttacagcacgtctgagagtaacgtcaaccgccagcaa
tatccacctcgagctccgagcatttctgagaacgtgatgatggaaactctgccggatgat
atggagagttgcaatggtgttgaggatggtttgatgatggctgatgatgctgttcagtgt
atcacaactcaaaacgcagattcccctcaacatacaggcgtagcgcaccggaaccaaagc
tttggttctccacaacattgtcatctccagagacgtctggctttggtggaggggaatatg
aatgctgtagctagacaaacagccagctctcagcagacatttccaggttcggccaatgcc
acaaagatcccgatgccggtgcagtggaatgaggtcagttcagggacggtggattcatct
cgcagccaaaccaagcagggatccgggcggggaaacctccaacaaaaacaaaacctcagc
tcatttctgaatgtcaactccaaccagcaagtcggtctgatgagccacaaccttgccttg
agtcccgtacagcgcagtgttgagtttaattccctgaggatcaatcagaggcaggctaac
gcagagtttctgcatggttaccttcagggttctgcttcgaatgacatcagtcttggtttg
ctaaacccgtctggtaaatcgctgactgtacaacctggtggcgtgcagaataatagggta
tgcgctcaagcccaaagccatgccacttttccaaataatcaaggaaattactcccagatg
agcagcaaccagcaaggctacatcgtagcgtcccagaatgtgaacggaaacctgctccta
cagccaaggccgcccacagaacccaaaccctacagcacgcagcattcagggccaacaaca
actgcagcacaatccaactttagccctgcatacgacacctcagaggcaagcccaaaaaaa
tccagctccatgttttacaccggccagattcacatgtttgattcgagcggcgctatgccc
tgcccatcttcagtgggctcccctgaaactaatcaagtctccagtacggtggattcaagt
ggagccgatcccccgcagattgattttgacgctatgctagacgacggcgatcattccagc
ctcatgtcaggaactttaagccccgccctcctgcgcagcctatcgcagaattcctctcgt
ctcaccacgcccagaaattcggtgacgttgccgccggtggccgcaggcatcagtaacatg
gccatcggagacatgagctccatgttaactgcgctagcagaggagagcaaattcctcaat
atgatgtcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (68)   

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