KEGG   Danio rerio (zebrafish): 553393
Entry
553393            CDS       T01004                                 
Symbol
si:dkeyp-118h3.6
Name
(RefSeq) ashwin
  KO
K15432  ashwin
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dre03016]
    553393 (si:dkeyp-118h3.6)
Transfer RNA biogenesis [BR:dre03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    553393 (si:dkeyp-118h3.6)
SSDB
Motif
Pfam: Ashwin
Other DBs
NCBI-GeneID: 553393
NCBI-ProteinID: NP_001137405
ZFIN: ZDB-GENE-050809-8
Ensembl: ENSDARG00000042025
UniProt: Q32LR5
Position
9:complement(6607514..6618067)
AA seq 227 aa
MASHRTDRTKNPTSNGDVSKVDLLLHPELLSQEFIQLMLQERNIAVSDPEDRDRLTGLYL
QHVIPLPQRELPRSRWGKRMEKSRPRLSSSSTHSSSTDSGRKRPLIVFDGSSTSTGCVKL
KKPDSSSAPVTTDRLKPPVSSVSLTNPIRKLSGASTNCSSSNFSNRTPVSSSGAIPKSPS
NHSNSSVHSNNATSKLKRTSPSKGEPDTAKDIKSPETKKKIQHITWP
NT seq 684 nt   +upstreamnt  +downstreamnt
atggcgtcgcacaggacagacagaacgaaaaaccccacatcaaatggagatgtttccaaa
gtcgaccttctgcttcatccagagcttctttctcaagagttcattcagctcatgttacaa
gagaggaatatagcagtgtctgatcctgaggaccgggaccggctcacaggcctgtacctg
cagcatgtgattcctctcccgcagagagaactgccacgcagccgctgggggaagaggatg
gagaagagcagaccacgcctaagctccagcagcacacacagttccagcactgatagtggc
aggaagaggccgttgatagtgtttgacggcagctctactagcactggctgtgttaagctg
aagaaaccggactcttcatcggcacctgtcaccacagacagacttaagcccccggtttcc
agtgtcagtctcacaaaccccatacgcaagctctctggggcatccacaaactgctcttcc
tcaaacttctctaacaggaccccagtttcatcgtcaggtgccattcccaagagcccctct
aaccactccaactcctccgtgcattcaaacaatgccacgtctaagctaaagcgcacgtcc
cccagcaaaggagaaccagacactgctaaggacataaagtcacctgaaacaaagaaaaag
attcaacatatcacatggccgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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