KEGG   Danio rerio (zebrafish): 553492
Entry
553492            CDS       T01004                                 
Name
(RefSeq) transcription factor TFIIIB component B'' homolog isoform X1
  KO
K15198  transcription factor TFIIIB component B''
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    553492
Transcription machinery [BR:dre03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIB
     553492
SSDB
Motif
Pfam: Myb_DNA-bind_7 Myb_DNA-binding
Other DBs
NCBI-GeneID: 553492
NCBI-ProteinID: XP_009300002
Ensembl: ENSDARG00000117211
UniProt: A0A8M3AZV6
Position
5:complement(43824025..43859148)
AA seq 2293 aa
MRRARISIKPNVRPGGRSVGPSPEDKSSQDSPAVDDTQKTVSPPPQSQPEVKESAEAIGD
GHFPGSPTEKAALNTDSKDRAPSSAKTTATPALQRRGRLSVAPNLARPKLRSTADPPPSA
NKTASLPSESSKTSSPIQAPKSFPQPPVPVAISEDVSQNSKFSGSTAAAHCPPSSPCLLS
ISGCPESPSFTSSHQEPCKSPLKIQSKDVGLLEGGAPAPSTFSPYVKLSRVDGPGSPLRE
KILSDKERVLRALKLKELMKMERSKERMQRRGRHKREHVYEMDPDKMTLADFIYYIPDTN
PMKSSLSTEEVQTAPTATAISPSPLVQKYMADEDDDDADDDMLVPKVRVAEDGSLILDEE
SLTVRVQRASDTVIDNTNLLFERGSTTTYSSFRKNYHVKNWSVRETDMFYLAISMVGTDF
SMMAQLLTHRNRTEIKSKFKKEEKENAWRVDKAFREKRPYDAEFFSFLLKRILAKDKEKG
KAIKLVVKPSKAKKPKSKGGKKAKEIVEDFMSDNDCDELCSVDSGSFDLEKENEDCSNLK
EADVQSAKKRKGKKDKQCEKTSKPRKTLKKGVCSIDDEDECVDNDLVEVDPVGADNEDQS
CMPVSKKKRKRSKKDDQEEQKEKADAKVKRQKKNKKTLKVQNEEHADGESEAVNEEHSEV
STIPNKKRKRSKKSEKEDEDPTKQKPKTKKSKTSPQDFSGSEPGAEGIEISAAATSAEGD
HGEMLNQDSAVQEISKSSSKRSKKPLPKLVKRKSKKCTEPQAAEEMEDAVEQPEDESCTD
AGNKSRILLAEEQLQKQPVVVLERTPPRLKESYNSTESQDGPQSSKSPQCSPGRKMRAEK
VKRNLSAADGGREVHSCEEDHRENLSPESSAQEAASQSFSRHSPSWQTRAAKVKPDLAPS
EREQMEQFKARSDSSAEDISSTAIPDQIVSQDSEVMGADQCTEEEEYNLQSVTSSEVIGQ
TFLKKAVVSVSHEEVQHYLRVQAQNTAEESTASESLQDTTPDRRHQVEENREGFKEQGSS
SVTVSQEAEMKESPTASVSAQQSITATRRRVLKPTPRLSREAQSSRRPLNVQTIESSQNT
SSLKEQVNLTPNENIEEEHRDCPEEEDTHSVSPQENSSHDVQDDLRSTADDSPSTSSVEI
PETVDKPMACNTDVPERKTELAASPAPIFEIEDQIRDQEEQDSEFEITESTINEIMTEIK
RSIPVSFSGDETHCQIAKPTSSIECEPQVSVSPQHTSEPNEDSAKKPDHQSPSIAQHSDL
DQGIEPFSGEDKPVSSVVDLRECKQDEDLLCPVPLLNSTQTPVPVVSAGTEIKQQNNPAF
SDASLEPLKPQSLDSSISDHLTQHTSNLYDTDALMFSVPAAENIQIPDKQDSAKQDCAEE
QSSVSENWSVPLDGDSKAEISISSGVETGASDYQAEEPTFILTLYEIPTSELFSEGISGE
QDTLPYELQPAQVHTPSRLKGNSQTPSFTEEPSSASLHMASEEPEKPGESVSCEDDPLVC
LSKYPENASTQLIYTQESSYDGVNSLICPSEMLSATLTDVPNLDETTTKASETKAPAQRR
SKIKIKPKLKPCLKAGPSRNVQLDPASSQSPPSSHAKAETESESKQKTSAQETIDPKIHS
DPEDSELGAHSGHDCVVSVATVPVSEEMTVEHPLQIEVDQMDQVFPVHSTVMDVSKDRSD
YGCEGVSHMVLADTFMLSSGEIDSVLNVLESPNNSELQEEREKVVLEVNDQKETMGDIAG
KQDSCLKTSSVLPSTFQEQSKPFSRCKLTSPTEDMSSQEQSDIGFNDPATAQIISPEPLI
KEELEERTEQEEDVSEEELDARPALMTLSTQDLTSFTSEKSLACSDSPSVEMKKEGGSLD
VTHIVLSDIFVPVSNETQDDVNMERGCSVQSVNQMGEEERRSYERVCHVVLTDILRSPRL
TERPQLREEAQSSHAESSVSPKRNRPAQGKGTQCSKPTLSKRIDDPSETDLIPPSSAQSS
LAAPQQSLDHQAEEWTFKSNMLPIDSDEIENWCEGVSHMLLSDAFVPVSEENEENNTNLK
MFDSSSPHDNKEFARSPSIRRKTPSVISDNTPPIDSTTEIPEIGVSKESLPASQAKESPT
TNTFHMTLRSPERCIKDQPKVQKSPQAASTTPQRTLTSKVKESVESPSRQHIGETSSLCR
VQLERLSMEEIRAAQSVLQPKHHSTPVTVKTTSRGNETQIVSSLALLGSRSPGFELQAGE
ETHVPSGFSPKIVLHRIPITPTSSPARAPTASQTSADGQSPQSSPSAGESSKDPVQVSQF
FLDDIFTEVEDTD
NT seq 6882 nt   +upstreamnt  +downstreamnt
atgagaagagcaaggattagtattaagcctaatgtcaggccagggggtcgaagtgttgga
ccttctccagaggacaagagcagccaggactccccagctgttgatgacacccagaaaaca
gtgtcacctcctccacagtctcagccggaggtgaaagagtctgccgaggctataggagat
ggacactttcctggctctcctactgagaaagcggcactgaacactgacagtaaagataga
gcgccatctagtgccaagacaactgcaactccagcacttcagaggaggggcagattatct
gtcgccccaaacctggccagacccaaactccgttctacagctgatcctcctccatcggct
aacaaaactgcttctcttccatcagagtcttccaaaacctcgtcccctatccaagcaccc
aagtcttttcctcagcctcctgtcccagttgctatcagtgaagatgtttctcaaaactct
aaattttctggctctactgcagcagcccattgccctccatcatcaccatgtcttctatcc
atctctggctgcccagaatctccatccttcacatcatctcatcaagagccctgcaaatct
cccctgaaaatccaaagcaaggacgttggactcctagaaggaggtgctccagctccctcc
acattctctccgtatgtgaagctgtcacgtgttgatggacctggttctcctctcagggag
aaaatcctctcggacaaggagcgagtcttaagggccctcaaactgaaagaactgatgaag
atggagaggtcaaaggaaagaatgcaacggcgcggacggcataagcgcgaacatgtctat
gagatggatcctgataaaatgactttagctgacttcatttattacatcccagatactaat
cctatgaagtcttccctttcaacagaggaggttcagacagcacctactgctactgctatt
tctccatctcccttggtgcagaaatacatggcagatgaggatgatgatgatgcagatgat
gatatgctggttcctaaagtgagggtggcagaggacggctcactaattttggatgaagaa
agtttgacagtgcgtgttcagagggcatctgatacagttatcgacaatacaaatctactg
tttgaacgaggctctactacaacatacagcagtttcaggaaaaattaccatgtgaagaac
tggtctgtcagagagacggatatgttttatctggccatcagtatggtaggaacagacttc
agcatgatggctcagctgctgactcaccgtaacagaacagaaattaagagtaaatttaaa
aaggaggagaaagagaacgcatggcgagttgataaagcattcagagaaaagcggccatat
gatgcagagtttttcagctttctgctgaagagaattttggctaaagacaaagaaaaaggc
aaagccataaaactggttgttaagcccagtaaagcaaaaaaacccaaaagcaaaggtggc
aagaaagccaaagaaattgttgaggacttcatgagtgataatgattgtgatgaattgtgc
agtgtggacagtggcagctttgatttggaaaaggagaatgaagactgcagtaatttgaag
gaagctgatgtgcaatcagccaagaagcgtaaaggcaaaaaggataagcaatgtgagaaa
acatccaagccaaggaagactttaaaaaaaggtgtatgctcaattgatgatgaagatgag
tgtgtggacaatgacttggtggaagtggaccctgtgggcgcagacaatgaagatcagtca
tgcatgcctgtatcaaaaaagaagcgcaaacgttcaaaaaaggatgaccaggaggagcag
aaagaaaaagcggatgccaaagtaaaacgccagaaaaagaacaaaaaaacactgaaagtt
caaaatgaagaacatgctgatggggaaagcgaagcagtgaatgaggagcacagtgaggtg
tctaccatcccaaataaaaaacggaaacgctctaaaaagtctgaaaaggaagatgaagat
cccaccaaacagaaaccgaagactaaaaagagcaaaacatcaccacaagattttagtgga
tctgagccaggagctgaaggaattgaaatctcagcagcagccaccagtgctgaaggggat
catggggagatgctcaatcaagacagcgcagttcaggagatttcgaaaagctcttccaaa
cgttccaagaagcctttgcccaagttagtaaaaagaaaatccaagaaatgtactgaacca
caagcagcagaagagatggaagatgcagtagaacagcctgaagatgaaagctgcacagat
gctggtaataagtccaggatcctccttgctgaggagcagctccagaagcagccagttgtt
gttttggagagaactcctccacggttaaaagagtcatacaactcgactgaaagtcaagac
gggccacagtcctctaaaagcccacaatgctctcctggaagaaagatgagagcagagaag
gtcaagcgcaatctgtctgctgcggatggtggtcgtgaagtccacagttgtgaagaggat
catagggaaaatctcagtccagagagttcagctcaggaggcggcttctcaaagcttctcc
agacattctccgagttggcagacgagagcagcaaaggtcaagcccgatctggctccctca
gaaagagaacagatggagcagtttaaggctagatcagattcatcagcagaggacataagc
agcactgccatccctgatcagatcgtcagccaagactctgaagtgatgggcgctgatcag
tgcacggaggaggaggaatataatttgcagtctgtgacttcatctgaagtaattggtcag
acatttctgaaaaaagcagttgtgtctgtgtctcatgaagaagtacagcattacctcagg
gttcaagcccaaaacacagccgaggaatcaacagcatctgaaagtctgcaggacacaaca
cctgacagacgccatcaggtggaagagaatagagagggttttaaggagcagggctcttct
agtgttactgtctctcaagaagcagagatgaaagagtcacccactgcctcagtttctgcc
caacagagcattactgcaacaaggagaagggttttgaagcccacaccaaggctcagtcgg
gaagcacagtccagccgcagacctctaaatgtacagactatagaatcgagtcaaaatacc
tcatctttaaaagagcaagtgaacctcacaccgaatgaaaacattgaggaagagcacagg
gactgtcctgaagaagaggacacacatagtgtttctccacaagagaacagctctcatgat
gttcaggatgatctcagatccacagctgatgattctccttccacatcatcagttgaaatc
cccgaaacagttgacaaacctatggcttgtaatacagatgtacctgaaagaaaaacagag
cttgctgcatctccagccccgattttcgagattgaagatcaaatcagggatcaagaggaa
caggattcagagtttgagatcacagagagcacgatcaatgagataatgacagagataaaa
aggagtattccagtcagcttttccggtgatgaaacacactgtcaaattgcaaagcccact
tccagcatagaatgtgaacctcaggtctctgtgagccctcaacatacctcagagcctaat
gaagattctgccaagaagccagatcatcagagcccttcgatagcccagcacagtgattta
gatcaaggcatagagcctttctctggagaagataagcctgtgtcatctgtagtggatttg
cgggaatgtaaacaggatgaggatcttctgtgtcctgtcccattgcttaactcaacacaa
acaccagtccctgtggtcagtgctggcacagaaatcaaacaacagaataacccagctttt
agtgatgcttcattggaaccattaaaaccacagagtctggattcatctatttctgatcat
ctcacccaacataccagcaacttgtacgatactgatgcgttgatgtttagtgtgcctgca
gctgaaaacatccaaataccagataaacaggattcagcaaaacaagactgcgctgaagag
caatcgtcagtttctgagaactggagtgtccctctcgatggggattcaaaagctgaaatc
tcaatctcatctggagtggagacaggtgcatctgattaccaggcagaggagcccaccttt
attttgactctgtatgagattccaacctctgagctgtttagtgagggaatcagcggggag
caggacacactgccctatgaactacagcctgcacaagtccacacaccctcacggttgaaa
ggcaattcacaaactccttccttcacagaagagccttccagtgcatctctgcacatggca
tcagaagagccagagaaaccaggtgaaagtgtttcttgtgaggatgatcctctggtttgt
ctttcaaagtatccagaaaatgccagtacacaattgatatacacacaggaaagcagttat
gatggtgtgaactctttaatttgtccatctgagatgctctcggccacgcttacagatgtg
ccaaatttggatgagaccacaacaaaagcatcagaaacaaaagctcctgctcagaggaga
agcaagataaagatcaagccaaaactgaagccatgtttgaaagctggaccttcaagaaat
gtccagttggaccctgcaagcagtcagagtccaccatcatctcatgccaaagctgaaact
gagagcgagtccaaacagaaaacatctgcacaagaaactattgatcctaaaatccactca
gaccctgaagacagtgagctgggagcccattctggacatgactgtgtagtttcagtagcc
actgtgccagtttctgaagagatgacagttgagcatcctcttcaaatagaagttgaccag
atggaccaagtctttccagtgcacagtacagtcatggacgtgtccaaggatagaagtgat
tatggttgtgagggtgtttcacacatggtgctggctgacaccttcatgctctcttcagga
gaaatagatagtgttttaaatgtgttggaaagccctaataatagtgagcttcaagaagag
agagagaaagttgtccttgaagttaatgaccaaaaggaaacaatgggagatattgctgga
aagcaggatagttgcctaaagacatcaagtgtgctgccatcaacatttcaagagcagtct
aagccctttagcagatgcaaactaacatctcctactgaggacatgtcaagtcaagagcag
tctgatattgggtttaatgatccagccacagctcaaatcatttcaccagaacctctaatt
aaagaagaattagaagagagaacggagcaagaagaagatgtgtctgaggaagaattagat
gcaaggcctgccttgatgactttgtctacacaggatcttacgtcattcacatctgaaaaa
tcattagcatgcagtgattcgccatctgtggaaatgaaaaaagagggaggttctcttgat
gtgacgcacatagtgttgtctgatatatttgtgccggtttctaatgaaacacaagatgat
gttaatatggagagaggctgttctgtccaaagcgtcaaccagatgggtgaagaggagaga
cgatcatatgagagagtttgtcatgtggtgctgactgatatattgagaagccctcgattg
acagaaagacctcagctgagagaggaggcacagtcatcacatgctgaatcgtcagtatca
cccaagaggaacaggcctgctcagggaaaaggcacacagtgttcaaaacctacattatca
aaaaggatagacgatccttcagaaactgacctcattccacccagctctgcacagagctct
ctggctgcacctcaacagtctctggaccatcaagcagaggaatggacctttaaaagcaat
atgttgcccatagactcagatgagattgagaactggtgtgaaggagtttcccacatgttg
ctgtcagatgcatttgtgcctgtttctgaagagaatgaggagaacaacacaaacctaaaa
atgtttgactcgagcagtcctcatgacaataaggaatttgctcgaagtccatcaataagg
aggaagacaccttcagtgatatcagataatacgcctccaatagactctaccactgaaata
ccagagattggggtctcaaaagagagtctgcctgcatcacaagccaaagaatcaccaaca
acaaatacatttcacatgacactaagatcacctgaaagatgcattaaagatcagcctaaa
gtgcagaagtctcctcaggctgcctcaacgacacctcagcggactctgacatcaaaagtg
aaggagtcagtggagtctccatcaaggcaacacataggagagacctcaagtttgtgtaga
gtacagttagagaggttgtcgatggaggaaatccgtgctgctcaaagtgttctgcagcca
aaacatcacagcacgcctgtcactgtgaaaaccacttctagaggaaatgaaacccaaata
gtatcatctctggctttgcttggaagcagaagtcctggttttgaactgcaagctggtgaa
gagacacatgtaccatcaggattctcaccaaagattgttcttcaccgtattcctataaca
cctacctcatctccagctagagcacccacagcctctcaaacatcggcagatgggcagtct
cctcaaagcagcccttctgctggggaatcttctaaggatccagttcaggtgtctcagttc
ttcctggatgatatcttcactgaagtcgaggataccgactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (73)   
   KEGG ORTHOLOGY (1)   
   RefGene (68)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (95)   

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