KEGG T01004: 555286

Danio rerio (zebrafish): 555286

Entry

555286            CDS       T01004

Symbol

tox3

Name

(RefSeq) TOX high mobility group box family member 3 isoform X1

K28489

thymocyte selection-associated high mobility group box protein

Organism

dre Danio rerio (zebrafish)

Brite

KEGG Orthology (KO) [BR:dre00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    555286 (tox3)
Transcription factors [BR:dre03000]
Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TOX
    555286 (tox3)

SSDB

Motif

Pfam:

HMG_box HMG_box_2 HMG_WDHD1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

ZFIN:

Ensembl:

UniProt:

Position

7:36875436..37168161

AA seq 587 aa
MSSASPRGNMDVFYPSAGGNSIPGDPQNLDFSHCLGYYNYNKFANNNNYMNMADANGALL
AGGDTFHTPSLGDEEFEIPPITPPPETEPGMGLQDVGSPYPGLPDHPNPQRGSFTPQFPP
QSLELPSITISRNMMEHEGQINNGHSGVVGQTHLRQYPPNPTMVMRSIISMHNPNGMMSQ
NQLTTINQSQINAQLGLNMTGSNIAHTSPSPPASKSATPSPSSSINEDDQEEGNRVIGEK
RPAPDAGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVAS
MWDGLGEEQKQVYKSKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTS
LSPALVLPSPLSQHPSMSAAAQALQQALPRAIAPKPLQMRVGGSQIVTSVTVAHQNMTPG
SVQSQLLGQMGPQSSVSSQLSPPMQPRHSSMQQQMQQQHQMQQHLQHHQMQQQQMHHQQI
QQQMQQQHFQHHLQQQLQQHHMQQQQQQHQQMQQQQMQMQHMQQMQQMHQHQMQQQHLPQ
SQCSPVQHSPGTPHSASLGSPPPPPAPQQHPSQVQTHAQVLSQVSIY

NT seq 1764 nt +upstreamnt +downstreamnt
atgagcagcgcttcgccgagaggaaacatggatgtattttatccgtcagccggagggaat
tctattcctggggatccacagaacctggatttttcccactgtctgggatactacaactac
aacaagtttgcgaataacaacaactacatgaacatggctgatgccaacggagctctgtta
gcaggaggagatacatttcatactccaagtctgggtgacgaggagtttgaaatacccccc
atcaccccacctccagagaccgagcctggtatgggccttcaggacgtgggctcaccttac
cctgggctacctgaccatcctaaccctcagcgggggtctttcaccccgcagttcccaccc
cagagcctggagctgccctccatcaccatctccagaaatatgatggagcatgaagggcaa
atcaacaatggacattcaggggttgttggtcagacacatctccgtcagtatcctccaaac
cccactatggtgatgcgctccatcattagcatgcacaaccccaatggcatgatgtctcaa
aaccagctcaccactatcaaccagtcccagatcaacgcacagctggggctgaatatgact
gggtcaaacattgctcacacatccccatctccacctgccagcaaatctgctacaccttca
ccctccagctccatcaatgaagacgatcaggaggaaggaaacagggttattggtgaaaag
cgccctgcccctgatgctggaaagaagccaaagacgcccaagaaaaagaagaagaaggat
cccaatgagccccagaagccagtgtctgcatatgccctgttcttcagagacacccaggct
gccattaaaggccaaaaccccaacgccacattcggagaggtgtccaagatagtagcctcc
atgtgggatggactgggagaagagcagaagcaggtttacaaaagcaaaacagaagcggca
aagaaggagtacctgaaagctctcgcagcataccgtgctagccttgtgtcaaaggcggcc
gcagagtcagcggaggcccagaccatccgctctgtgcagcagactctggcttccaccagc
ctctcgccagcgctcgtgctgccgtctcctctgtcccagcacccctccatgtctgcagct
gcacaggcactccagcaggccctgcctcgagccatcgccccaaaacctctgcaaatgcgt
gtcggcggcagccagattgtcacctcggtcacggtagctcaccagaacatgacgcccggc
agcgtgcagtcgcagctgttggggcagatgggtccgcagtcgagcgtgtcgtcgcaattg
agtccgccaatgcaaccccgacattcatccatgcagcagcagatgcagcagcagcatcag
atgcagcagcatttgcagcaccaccaaatgcagcaacagcaaatgcaccaccagcagatc
cagcagcagatgcagcagcagcatttccagcatcacctgcagcagcagcttcagcagcac
cacatgcagcagcagcagcagcagcaccaacagatgcagcagcagcagatgcagatgcag
cacatgcagcagatgcagcaaatgcatcagcatcaaatgcagcagcagcatcttccgcag
tcgcagtgttcacccgtgcagcattcgcccggtacgccacattcagcttctctcggcagc
ccgccgccgcctccagcgcctcagcaacacccatcacaggtacagacgcatgcacaggtc
ctgtcgcaagtcagcatctactga

All links

Gene (45)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (3)   
   Pfam (3)   
All databases (63)   

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