KEGG   Danio rerio (zebrafish): 555728
Entry
555728            CDS       T01004                                 
Symbol
carf
Name
(RefSeq) calcium-responsive transcription factor isoform X1
  KO
K21595  calcium-responsive transcription factor
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    555728 (carf)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Other transcription factors
   Others
    555728 (carf)
SSDB
Motif
Pfam: ALS2CR8 DUF4751
Other DBs
NCBI-GeneID: 555728
NCBI-ProteinID: XP_021334520
ZFIN: ZDB-GENE-070912-172
Ensembl: ENSDARG00000019950
UniProt: A0A8M9QJZ6
Position
9:13229513..13251327
AA seq 668 aa
MEEEERDVEDVLKSEGEDAQPAETQAEMVKKEEPDTILNAEETAHAPELSLVIPAPDVSG
TANQKPSILPRLDNFVIVDQNGHPIPYERLVIVTGGNGQIFGVPSVPLSGAQMLLPHGQL
LNVAKSSGVFVEKRQQPVITTIKENDGAHSLPATTAQNITAIKIQKKSFPDVFEPPVKPL
PPGSPNWALRLRGCEKIGDSYRGYCNTETELEAVLLQHKQQTHAVFGTRQSPSPAKPATR
LMWKSQYVPYDGIPFVNAGSRAIVMECQFGPRRKGVQPKKGSEQEKYQNKLYKATCPARI
YIKKVRKFLEYKVPIDPKVNKKVVRQEQEKAFFNLKNSLWDDGGVVRYYVQLPTEKAHLY
HDVETVNLPPLPDQICFTEDHPHEEEDTEELGFQAMQDVLVEDGVSLPESRLHPLVAEKI
CELVAHGHNQVYTVRKQLSSCECPGRRFVEREMFKSEEVPERHNLCYFPTVNDIKNHIHE
AQKTLGPLDGSDNEWKEEADNLLSETLTLTLTPATVDVSSEKEELMEGSDTLSSEAVHLF
SSLTSLQPKIFAHLQTIQLQPPLCPVEDPAQPLTAAPEAQELSSPAASQPALLSPSQFLQ
SSPSAGEGRSVCETPTLLGMNQLVSVSNAGANGGITQILLEDGQAIPVQIVEPANIALTP
SADATSVK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggaggaggaagagagagatgtggaggatgttcttaagtctgaaggagaagatgcacag
cctgcagaaacacaagcagaaatggtaaagaaagaggaacctgacacaatcctaaacgct
gaagaaactgcacatgcaccagagctttccttagtcattccagcccctgatgtatctggg
acggccaatcagaagccctctattctaccacgattggataactttgttatagttgaccaa
aacggacatcccattccgtatgaacgattggtgattgtgacaggagggaatggacaaata
tttggcgtcccgtctgtgcctttaagtggcgctcagatgttactacctcatggtcaactt
ttgaatgtagcaaagtcatcaggcgtctttgtggaaaaaagacagcagcctgtcatcaca
accataaaagagaatgacggtgctcatagtttacctgcaacaacggctcagaatatcact
gctattaaaattcagaagaaaagttttcctgatgtatttgagcccccggtaaagccactg
ccaccagggtcaccaaactgggctctcagactgcgcgggtgtgagaagatcggggactcg
taccgtggttactgtaacacagagaccgagctggaggctgttctgcttcaacataagcag
cagacccacgctgtttttggcacccgtcagtccccatccccagctaaacctgccaccagg
cttatgtggaaatcacagtatgtgccctacgatggcattcccttcgttaatgcaggtagc
agagccattgtaatggaatgccagtttggtccacgaaggaagggcgtccaacctaaaaaa
ggatcagagcaagaaaagtatcaaaacaagctctacaaagctacctgtcctgccagaata
tatatcaagaaagtccgaaagttcctggagtacaaggttccaatagaccccaaagtgaac
aagaaggtggtgcgacaagagcaggagaaagccttcttcaaccttaagaacagtttatgg
gacgatggaggtgttgtaaggtattacgtccagctccctacagaaaaagcccacctgtac
catgatgtggagactgtaaacctgcctcctcttccagatcagatctgcttcacagaagac
catcctcatgaagaggaagacacagaagagctggggtttcaagccatgcaggacgtcctt
gtggaggatggggtatccctacccgagtctcgactacacccgctggtggcagagaagatc
tgtgaattggtggctcatggtcataaccaggtctacaccgtccgcaaacagctcagctct
tgtgaatgtcctggcaggaggtttgttgaacgtgagatgttcaagtcagaggaagtgcct
gagagacacaatctgtgttactttcccaccgtcaatgacatcaagaaccacatccacgag
gcgcagaaaactcttggaccactggacggttcagataatgagtggaaagaggaggctgat
aacctgctatcagagaccttgacattgacccttactcctgctactgtagacgtttcctct
gagaaggaagagctcatggaaggaagtgacactctttcttcagaggctgtgcatctcttc
agctccctcacatcactgcagcccaagatctttgcacatctacagaccattcagctccag
ccgcccttgtgtccagtggaagaccctgctcaacctttaacagcagcaccagaagcccaa
gagctgtccagccctgcagcctcacagcctgcactcctgagtccatcccaatttctccag
tctagtcccagtgctggcgaaggcaggtctgtgtgtgagaccccgaccctgcttggcatg
aaccagctagtgagtgtctctaatgctggagctaatggaggaatcacacagatcctgctg
gaggatggacaggctattccagtccagattgtggagccggcaaacatagcattgactccc
tcagcggacgccacttctgtgaagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (16)   
   RefSeq(nuc) (6)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (47)   

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