KEGG   Danio rerio (zebrafish): 556641
Entry
556641            CDS       T01004                                 
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
  KO
K01115  phospholipase D1/2 [EC:3.1.4.4]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00564  Glycerophospholipid metabolism
dre00565  Ether lipid metabolism
dre01100  Metabolic pathways
dre04144  Endocytosis
dre04912  GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09103 Lipid metabolism
   00564 Glycerophospholipid metabolism
    556641 (pld1a)
   00565 Ether lipid metabolism
    556641 (pld1a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    556641 (pld1a)
 09150 Organismal Systems
  09152 Endocrine system
   04912 GnRH signaling pathway
    556641 (pld1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    556641 (pld1a)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.4  phospholipase D
     556641 (pld1a)
Membrane trafficking [BR:dre04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    556641 (pld1a)
 Endosome - Golgi transport
  Others
   Others
    556641 (pld1a)
SSDB
Motif
Pfam: PLDc PLDc_2 PX PH DUF3785
Other DBs
NCBI-GeneID: 556641
NCBI-ProteinID: NP_001153567
ZFIN: ZDB-GENE-031002-2
Ensembl: ENSDARG00000056228
UniProt: B0V1J1
Position
2:28897136..28968776
AA seq 1022 aa
MSDSVENLDTRELGFSDAEDEPEEVDFDFNPSGASRIGFSAIYRTVGFKDTEAHVYLTSL
PITAKILDVERFTRTQDRFKFSKHRSVSKAMPAVFKIELKHGNFTWIVKRKEKHFMELHR
ELLKYKTLMRIPLPTRSHTERRKSIKRSEVRQMPALPRGGGDGELAREEQVSSRRKQLED
YLNKLLKMAMYRKYYATMEFIDVSQLSFIQDLGPKGLEGIVYKRSGGHRIPGMNCCGHNE
VCYRWSKRWLIVKDSFLLYMKPDTGAISFVLLVDNEFSIKMDSKQTETKHGVRIENLSRK
LVLKFTSYRHARWWGQAIESFVRKHGKAFLRTHRFGSFAREEENIPSKWYVNGKTYMEDV
ANALEEAKEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFVMLYKEVEL
ALGINSEYSKKTLMHLHPNIKVMRHPDHVSSSVYLWAHHEKIVVIDQSVAFVGGIDLAYG
RWDDREHRLTDVGSVTRSVAQAIEQGLDSSTPKKKVSTSGNSSRSMVGDSVDLPKLKGIG
RTRKTRFSLYHHIQRGLHHADSISSIDSTNKSGSVHSLQTGVGELMGNTRFWHGKDYCNF
VFKDWVQLDKPFDDFIDRYTTPRMPWHDISSVVHGKAARDVARHFIQRWNFTKIMKPKYR
SLSYPFLLPKSHSTGNDLKYQVPDTVHTKVQVLRSAADWSAGIKYHEESIHNAYIQVIAK
SKHFIYIENQFFISCADNKHVYNKIGDAIIERIIRAHKENKKFRVYVVTPLLPGFEGDIT
TGGGNALQAVMHFNYRTMNRGEYSIISQLKKEMDDQWMNYISICGLRTHAELEGRLVTEL
IYVHSKLLIADDNTVIIGSANINDRSMLGKKDSEVAVIFEDSETTPSVMDGQEYQAGKFA
LQLRLECFKTILGAFTDPSIDVSDPISNSFYKDVWMSVSGRNVTIYEKVFRCLPSSLVRN
KQELLSFQSKTGLDKEDPLKAQELLKKIRGFLVQFPLDFLCEENLMPSVGTKEHMVPTEI
WT
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgagtgattcggtggagaacctggacaccagggaactgggcttctctgatgctgaggat
gaacctgaagaggtggactttgacttcaacccgtcaggtgcgtcccgtattgggttctct
gccatctaccggacagttggctttaaagacacagaagcacatgtctatctgacctctctc
ccaattactgccaagatcctggatgtggagcgcttcaccagaactcaagaccgcttcaag
ttctccaaacacaggagcgtgtctaaggcaatgccagcagtgtttaagatagagctcaaa
catgggaacttcacctggatagtgaagagaaaagagaagcacttcatggagctgcacaga
gagctcctgaaatacaagaccctcatgaggatcccactgcccacccgcagccacacagag
agaaggaaaagcatcaagaggagtgaggtgaggcagatgccagctctgccccggggaggt
ggagatggagagctggcgagagaggagcaggtgtctagtcgaaggaaacaactggaggac
tatctaaacaagctgctgaagatggcgatgtatagaaaatactacgcaacgatggagttt
attgatgtgagccagttgtccttcattcaggacttgggcccaaaaggattagaaggcata
gtttataagcggtcaggaggtcatcgtatcccgggcatgaactgctgtggccacaatgaa
gtctgctaccgctggtctaagaggtggcttattgtgaaggactcttttttgctgtatatg
aagccggacactggtgccatttcatttgtcctactggtggacaatgagtttagcatcaaa
atggactccaaacaaacagagacgaagcatggagtgaggatagaaaacctgtctaggaaa
ctagtgctgaaattcactagttacagacatgcccgctggtgggggcaggccattgaaagc
tttgtgaggaaacatggcaaggcttttttgaggacccacagattcggatcctttgccagg
gaggaggagaacataccctctaaatggtatgttaatggcaaaacctacatggaagatgtt
gcaaatgccctagaggaggccaaagaggagatcttcatcacagactggtggctgagccct
gagatctttctgaagaggcctgtggtggaaggcaatcgctggaggctcgactgcattttg
aaacgcaaggctcaacaaggagtgaggatctttgttatgttgtataaggaagtggagctg
gcactcggcatcaacagtgaatacagcaaaaaaacactaatgcatcttcatccaaacatt
aaagtgatgagacaccctgatcacgtgtcctcctccgtctacttatgggcacatcatgaa
aagattgtagtgattgaccagtcagttgcttttgttggtggaattgacctggcttatggc
cgctgggatgaccgtgagcaccggctgacagatgtgggaagtgtaacacgatctgttgct
caagccatagagcagggactggattcatccacacccaagaagaaagtgtccaccagtggg
aacagcagccggtcaatggttggtgactcagtggatctgcctaaactaaaaggcatcggt
cgcactcgcaagactcgttttagcctgtaccatcacatccaacgtggccttcaccatgct
gacagcatcagcagcatcgacagcacaaacaagagtggctcagtgcacagtcttcagaca
ggagtgggagagctgatgggaaacacacgcttctggcacggcaaggactactgcaacttt
gtcttcaaagactgggttcagctggacaagccctttgatgactttatcgacaggtacaca
acccctagaatgccctggcatgatatctcctcagtggtgcatggaaaagcagccagagat
gtggccaggcactttatacaacgctggaacttcaccaagataatgaagccgaagtacaga
tcgctctcctacccatttctacttcctaaatctcacagcacaggcaatgatctgaagtac
caagtgccagacactgttcacaccaaagttcaggttctgcggtcggcagcagactggtca
gcgggcatcaagtaccatgaggaatccattcataatgcctacattcaggtcattgccaag
agcaagcacttcatctacatcgagaaccagttcttcatcagctgtgccgataacaaacat
gtttacaacaagattggtgacgccattattgagcgaatcatcagagcacacaaggagaat
aaaaagttccgtgtgtatgtggtgactcctcttctgcctggatttgagggagacattacc
acaggaggaggaaatgcactccaggcggttatgcatttcaactacaggaccatgaaccga
ggagagtactccataatctctcagctaaagaaggaaatggatgaccagtggatgaactac
atctccatctgtggtctgaggactcatgcggagctggagggtcgactggtgactgaactc
atctatgttcatagcaagctgcttatcgctgatgacaacaccgtcattatcggctctgcc
aacataaatgaccgcagcatgttgggcaagaaggacagtgaggtggctgtgatatttgag
gactctgaaaccacgccatcagtgatggacggtcaagagtaccaggccggcaagtttgcc
cttcagctcagactggagtgcttcaagaccattcttggtgcctttactgacccaagcatt
gacgtcagcgaccccatcagcaacagcttctacaaggacgtctggatgagcgtctcaggt
cgaaacgtcaccatctacgagaaggttttccgctgtctgccctccagcctggtgagaaac
aaacaggagctcctgagtttccagtccaaaactggtctggataaagaggatccacttaag
gctcaggagctgctgaagaagatcaggggcttcctggtccagtttcccctagacttcctc
tgtgaggaaaacctcatgccctcggtgggcaccaaagaacacatggtgcccaccgagatc
tggacctga

  All links  
Gene (19)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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