KEGG   Danio rerio (zebrafish): 562350
Entry
562350            CDS       T01004                                 
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
  KO
K14301  nuclear pore complex protein Nup107
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    562350 (nup107)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    562350 (nup107)
   03036 Chromosome and associated proteins [BR:dre03036]
    562350 (nup107)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     562350 (nup107)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    562350 (nup107)
SSDB
Motif
Pfam: Nup84_Nup100 HisK_sensor
Other DBs
NCBI-GeneID: 562350
NCBI-ProteinID: NP_001025338
ZFIN: ZDB-GENE-041210-245
Ensembl: ENSDARG00000016010
UniProt: Q5RGI2
Position
4:complement(22730795..22749553)
AA seq 919 aa
MEWSQTWLSPVVRDAEVTRAARRKSSHKKVAFPLAQDDSPGTSTTPARPLLRQTPGPRLK
QTFTPRSALRNPDVSAILGTSGSRTPRFVNTPRTKGGLSMNLDDSDWTNSLYPSPLSGIV
DTSFTDDVSMSALMLKEDDPGEAASLGLFPEFLESYLRHASTAVFDLLEEYEALCQDKVS
VLQKLVLRSAPGQQKSSKTVSITWLLQQEMVTWRLITSLYRDRVQTVLEEDIMMDITMPS
ESEKAVMEQFFQKDSMVRQSQLVVDWLESIAKDDIGDFSDNIEYYAKSVYWENTLHTLKL
RRNQSSGGLSRPLVTELDPDAPIRQKRPLADLDREDDSRLLKNLFNLIRAGMTDEAQRLC
KRCGQAWRAATLEGWKLYHDPNINGGGGELQPVEGNPHRSVWKVCCWRMAEEEQFNKYER
AIYAALSGNLKQLLPVCESWEDTVWAYFRVMVDTLVEQEICSSGLGSEELEELPRDFLET
NWTLEKVFEEIQATESKRVLDATKEHYHVIQKFVILGDLDGLLEEFSDWLGRNTPLPAHL
LRFMSHLVLFYRSLGMQLKEEVCVDVLKAYISLLVKEKQVELIAFYVSHLPADLAVSQYA
QFLEEVTETEQRKHCLELATQAGLEVAAITKTVVETIRERDTDEFSHHDLTPALDTATTV
EDQQKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHDAAKMVFAKVPEDSMREIYRQ
WEEQGMDTPLPAEEENAIREHLCIRAYLEAHEAFNEWFKHMNCPPVKPTAPAQAKFTEKV
AHEMKEAEYKIELENWQGRLGALTEDVKERIYNVLLFVDGGWMVDVREDAEEDSERSHQM
TLLRRLCLPMMSFLLLTVLQRTERHQESLRLADIIASDQHKLYEVFSKDELQKFLQKMRE
SSLLLLDKGLDPLGYEIQP
NT seq 2760 nt   +upstreamnt  +downstreamnt
atggaatggagtcagacttggttgagtccagtggttcgggacgctgaggtgacccgtgcg
gcccgcagaaagagttctcacaaaaaagttgctttcccgttggcacaggatgactctcct
ggcaccagcacgacccctgctcgacctctcctgcgccaaacacctggacctcgccttaaa
cagacattcaccccaagaagtgcccttaggaatcccgatgtgtctgccatcctcgggacc
tcaggaagcagaacccctcgcttcgtaaacacacctcgtaccaaaggcggcctgagcatg
aacttggatgacagtgactggacgaacagtctttacccatctcctctatcaggaatagtg
gacacaagctttactgacgacgttagcatgagtgctctgatgctgaaggaagatgatcct
ggagaggctgcttctcttggtttgtttcctgaattcctggagtcttatttgcgtcatgcg
tccacagccgtgtttgacctgttggaggaatatgaagctctctgtcaagataaggtcagt
gtgttgcagaaactggttctccgttcagcccctggccagcagaaatcctccaagactgtc
agcatcacctggttattgcagcaagagatggtgacctggagacttatcacctctctgtac
agagacagagttcagactgttttagaagaagacatcatgatggatattactatgcccagt
gagagtgagaaagcagtaatggagcagttcttccaaaaggacagtatggtgcgacagagc
cagctggtggtggattggttggagagtatagcaaaagacgatataggagacttctcggat
aacattgaatactatgctaaatctgtgtactgggagaacacactccacacgctgaagctg
aggaggaatcagtccagtggtggtttaagcaggccactggtcactgaactggatcccgat
gctcccatcagacagaaaagacccctggcagacctggacagagaggacgactctcgcctc
ctcaaaaacctcttcaatctcatacgagctggcatgactgatgaggctcagaggttgtgt
aagcgctgtggtcaggcctggcgtgctgccactttggaaggctggaaactctaccatgac
cccaacatcaatggagggggtggtgagcttcagcctgtggagggaaatcctcatcgcagc
gtctggaaggtttgctgctggagaatggcagaagaggagcagttcaacaaatatgaaagg
gctatctatgctgcgttgagcggaaacctcaaacagctgttgccggtgtgtgagtcctgg
gaagacacagtatgggcttatttccgggtgatggtggacactctggtcgagcaggagatc
tgttcttctggtctgggcagtgaagagctggaggagctgcccagagacttcctggagacc
aattggacgctggagaaagtctttgaagagattcaagcaacagagtccaagagagttctg
gacgcaaccaaggagcactaccatgtgattcagaagtttgtgattcttggagatcttgat
ggtcttcttgaggagttcagtgattggttgggaagaaatacacctttgccagcccatctc
ttacgcttcatgtcacatttagtgttgttttatcgcagtttgggcatgcagcttaaggag
gaggtgtgtgtagatgtcctgaaggcctacatctcgctgttggtgaaggaaaagcaggtg
gagctcattgcgttttacgtcagtcaccttcctgcagatttggctgtgtcacaatatgct
cagttcctggaggaagtcactgagactgagcagcgcaaacactgtctggagctcgcaaca
caagcaggtttggaagtggcagcaatcacaaaaacggtagtggaaaccatcagagagaga
gacacagatgaattttcccaccatgacctgacgcctgcactggacacggcaactacagtg
gaggatcagcagaagattgatgtgattgactggttggtgtttgatcctgctcaacgagct
gaagcacttaaacagagcaacgccatcatgaggaagttcttagcatctaagaagcatgac
gctgctaagatggtcttcgccaaagtgcccgaagactccatgcgtgagatctaccggcag
tgggaggagcagggtatggacacaccacttcctgcagaagaggagaatgccattcgtgaa
catctatgcattcgtgcttatctggaagcacacgaagcgtttaacgagtggttcaagcac
atgaactgtcctccggtgaagcccacagctcctgctcaagccaagtttacagagaaagtg
gctcatgagatgaaagaggctgagtacaagatagagctggagaactggcaggggcgtcta
ggagctctcactgaagatgtgaaggagaggatctataatgtgctgctgtttgtagacgga
ggctggatggtggatgtcagagaggatgctgaggaagactccgagcgttctcatcagatg
actctgctgcggcgtttgtgtttgcccatgatgtcttttcttctgttaactgtactgcag
cgaactgaacgccaccaggagagtctgcgtcttgctgacatcatcgcatctgaccaacac
aagctatatgaggttttctctaaagatgagctgcagaagtttctccaaaagatgagggaa
tcctctcttcttcttctggataaaggactggatcctctgggatatgagattcagccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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