KEGG   Danio rerio (zebrafish): 563090
Entry
563090            CDS       T01004                                 
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04350 TGF-beta signaling pathway
    563090 (sin3aa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    563090 (sin3aa)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     563090 (sin3aa)
    REST complex
     563090 (sin3aa)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    563090 (sin3aa)
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress DUF6706
Other DBs
NCBI-GeneID: 563090
NCBI-ProteinID: NP_001091650
ZFIN: ZDB-GENE-070620-3
Ensembl: ENSDARG00000079716
UniProt: A5D6S0
Position
25:complement(6349896..6391307)
AA seq 1276 aa
MRRRLEDQEPVFTPQQRRLPGSTEGFQHRVLAPAPAVFEAVADSMQPTPGIQYPLPQAYQ
VSTVAQSSSGHSHTPSPAVHSGPHHHGPAAAQAHAPPPVQGHAHPPTPSASTQGQQQFQR
LKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNIPIVPPPPPSQQQNQITTNP
PNLATTPPAQPAPKTKPLQSPVLTPSSQPNPSIPPYASPRSPPLQPNTPVSSMPIAPPLQ
NNQPVEFNHAINYVNKIKNRFQGQPNIYKSFLEILHKYQKEQRNAKEAGGSYTPVLTEQE
VYAEVAQLFKNQEDLLSEFGQFLPDANSTMLLGKTTAEKAESVRNDHGGTVKKPQLNNKQ
RPNQNGCQIRKHSTTAITPPVKKKLKLMNIKDSSGAEAGKHGGGTESLFFEKVRKVLRSA
EAYDNFLRCLVIFNEEIISRAELVQLVVPFLGKFPELFTWFKNFLGYKEMSHLETYPKER
ATEGIAMEIDYASCKRLGSSYRALPKSYQLPKCTGRTAICKEVLNDTWVSFPSWSEDSTF
VSSKKTQYEEHMYRCEDERFELDVVLETNLATIRVLETTQKKLSRMSAEEQAKFRLDNTL
GGFSEIIHRKAIQRIYGDKAPDIIDGLKKNPAASVPIVLKRLKLKEEEWREAQRGFNKIW
REQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIFDERQEQVSEDNSSTTASSPH
LTLTYEDHQILEDAAALIIHHVKRQSSINKEDKYKIKQIVYHFIPDMLFAQRGVLSDVEE
EDEEEDMELDEGASKKHNGLAGGASASPTKSKLLFSASTAQRLRSCEDAYNLFYVNNNWY
IFLRLHQILCSRLLRLYAQAERQIEEDMREREWEREVLGLKRDKNENTAVQLRLKEPMDV
EVEDYYSAFLEMVRNLLDGNMEASQYEDSLREMFTIHAYIAFTMDKLIQNIARQLQHIVS
EEICVQVTELYLVESGHSSTGGSLLTQSSRAQAEASYQRKAEQLMSDENCFKLMFLKSRG
NVQLTVELLDTEEENSDGPMEIERWSDYVMRYLSADFTSPDLKDHLSQKPVFLPRNLRRI
RKCQRGCEAQEKELKDGERKENADSMKMECMFKLNSYKMVYVFKSEDYMYRRTALLRAHQ
SHERVSTRLHQRFHAWSQRWAKEHVTRDMAAETSRWLMGEGREGLLPCSTSCDPEILHFQ
RINKYRVKYGPTNKPQ
NT seq 3831 nt   +upstreamnt  +downstreamnt
atgaggaggcgtttagaggatcaggagccagtgttcaccccacaacaacgccggcttccc
ggcagcactgagggcttccagcacagggttctggccccagcgcctgctgtattcgaggcg
gtggctgacagcatgcagcccactccaggaatacagtacccgcttcctcaagcataccag
gtgtccacagtggcccagagctccagtggtcacagtcacactcctagtccggcagtgcac
agcgggccgcatcaccatggcccggcggcggctcaagcccacgctcctccacccgtacag
ggtcacgctcatccgcccaccccgtctgcatccacacagggccagcagcagttccagaga
ctcaaggtggaggatgctctgtcttacctggatcaggtaaagctccagtttggcaatcag
ccacaggtctacaatgacttcctggatattatgaaggagtttaaatctcagagtattgac
accccaggcgtaatcagcagggtgtcgcagctctttaagggtcaccctgatctcattatg
gggttcaacacgtttcttccaccgggatacaagattgaagttcagaccaatgacctggtc
aacgtgactacacctggtcagatccaccacatcacacctcacggcatctccgtgcagaac
atccccatcgtaccgcctccaccgccctcacagcagcagaaccagatcaccacaaaccct
cccaatctggcaaccacacctcctgctcaacctgcacccaaaaccaagcctctgcagtct
ccagttttgactccgagcagtcagcccaatccgtctatccctccatacgcatctccgcgt
tcgccaccgctgcagcccaacaccccggtcagcagcatgcctatcgccccgccactgcag
aacaaccagcccgtggagttcaaccacgccatcaactacgtcaacaagatcaagaaccgc
ttccagggccagcccaacatctacaagtccttcctggagatcctgcacaaataccagaag
gagcagcgtaacgctaaagaagctggcggcagctacaccccagttctgactgaacaggag
gtttacgctgaagtagctcaactcttcaaaaaccaggaagatctgctctccgagttcgga
cagttccttccggacgccaacagcactatgctgctgggcaagacgacagcggagaaagcc
gaatctgtgcgtaatgatcatggaggaacggtaaagaaaccgcagctcaataacaaacag
aggcccaatcagaatggctgtcagatacgcaagcactcgactacagccatcacaccacct
gtcaagaaaaagctcaagttaatgaacataaaagattcatccggagcagaagctggaaaa
cacggcggaggaaccgagtctcttttctttgaaaaagtgcggaaggttttacgcagcgct
gaggcctatgacaacttccttcggtgcctggtcatctttaacgaggagatcatttcccgt
gctgagctggtgcaacttgtggttcctttccttggcaaatttcctgagctgttcacttgg
tttaagaacttccttggatataaggagatgtcacacctggagacgtacccgaaggaaaga
gccactgaaggaattgccatggaaatcgactacgcttcctgcaagcgtctgggctccagt
taccgagcgttacccaagagctaccagctgcccaagtgcacaggcagaacagcgatctgt
aaagaagtgctgaatgatacctgggtttcgtttccctcctggtctgaggactccaccttt
gtgagctccaagaagactcagtatgaagagcacatgtacagatgtgaggacgagcgcttc
gagctggatgtggtactggaaaccaacctggccaccattcgcgtgctggagaccacgcaa
aagaagctgtctcgaatgtcagccgaggaacaggccaaattcagactagacaacactctg
ggcggcttctctgagatcattcatagaaaagccatacagaggatatacggagacaaagct
ccagacatcatagacggactgaagaagaatccggcggcttctgttcccatcgttcttaag
aggctaaagctgaaggaagaagagtggcgtgaagctcagaggggctttaacaagatctgg
agggagcagaacgagaagtactatctgaaatctctggaccatcaaggcattaacttcaaa
cagaacgacactaaagtgctgcgctccaaaacactcctcaatgagatcgagagcatcttt
gatgagcggcaagagcaggtttcggaggacaacagcagcacaacggctagcagccctcac
ctgacgctaacctacgaagaccatcagattttagaagatgcggcggcgctaataattcac
cacgtgaaacgccaaagcagcatcaacaaagaggacaaatacaaaatcaagcagatcgtc
taccacttcatccccgacatgctgttcgcccagagaggagttttgtcagacgtggaggaa
gaggacgaagaggaagacatggagctcgatgaaggggcatccaaaaagcacaacgggctc
gctggaggagctagcgcaagccctactaaatccaaactgctgtttagcgcgtccacggct
cagcggcttcgctcttgtgaggacgcgtataatctgttttacgtcaataacaactggtac
atctttcttcggctgcatcagatcttgtgttcgcgattgctgagactttacgcgcaggcc
gagcggcagatcgaagaggacatgagggagcgcgagtgggagcgggaggtgcttggactc
aaacgagacaaaaatgaaaacaccgccgttcagctgcgtctgaaggagcccatggatgtg
gaagtggaggattattactctgcgtttctggagatggtgcgaaacctgctggatgggaat
atggaggcatctcaatatgaggattctctgagagagatgttcaccattcacgcttacatc
gccttcaccatggacaaactcatccagaatatagctagacagctccagcacattgtgagc
gaggagatctgcgttcaggtgacggagctgtacctggttgagagtggtcactcgtccacc
ggagggtctttgctcactcagagcagcagagctcaggctgaagcctcatatcagcgcaaa
gcagagcagctcatgtctgatgaaaactgctttaagctgatgttcctgaagagcagagga
aacgttcagctcacggtggagctgctggacacagaggaagaaaactcagatgggccgatg
gagatcgagcgctggtccgattatgtcatgcgatatctgtcggctgatttcacgtctcca
gacctgaaggatcatctctcccagaagcctgtgtttctgcccagaaacctgcgacgcatc
cgcaagtgtcagcgaggctgcgaggctcaggagaaggagctgaaggacggagagagaaag
gagaacgcagacagcatgaagatggagtgcatgttcaaactcaactcctacaagatggtg
tacgtcttcaaatccgaggattacatgtacagacgcactgcgctgctcagagcccatcag
tctcatgaacgagtgagcacccgtctgcaccagcgctttcacgcctggagtcagcgctgg
gccaaggagcacgtgacccgggacatggctgccgaaaccagccgctggctcatgggagag
ggtcgagagggactgctgccctgctccaccagctgtgaccccgaaatccttcacttccag
cgcatcaacaaatacagagtcaaatacggccccaccaacaagccccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (35)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (50)   

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