KEGG   Danio rerio (zebrafish): 563304
Entry
563304            CDS       T01004                                 
Symbol
ino80db
Name
(RefSeq) INO80 complex subunit D-B
  KO
K11668  INO80 complex subunit D
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    563304 (ino80db)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dre03036]
    563304 (ino80db)
Chromosome and associated proteins [BR:dre03036]
 Eukaryotic type
  Chromatin remodeling factors
   INO80 complex
    563304 (ino80db)
SSDB
Motif
Pfam: zf-C3Hc3H Lipocalin_5 HemY_N
Other DBs
NCBI-GeneID: 563304
NCBI-ProteinID: NP_001074057
ZFIN: ZDB-GENE-070112-2072
Ensembl: ENSDARG00000062226
UniProt: A1L1F6
Position
6:13232069..13254851
AA seq 843 aa
MYEGKHIHYSEVDHKPLCSYSPKLCKQRRLNGYAFCIRHVLEDRTAPFRQCEYVAKYNSQ
RCTNPIPKAHDRKYCNSHLQVMGVLPKKERKKKQDTIESLALNITVPSLALKTHNGLEIL
PPSPPPALVCLLPSDPFSFYKEEKMLKSSGAFLKKPQETLNHKQKQQDHSVDTNHLRTSS
LPSTLSHSCLPPLLTGRATQTPINPSSPRAATPTVRSGSLFKTSSSLQDTHQGSKDSTDN
KIKLDLNHAFDKKVVPAASGMAPCCDDTQSQLIKKCTVAMQQQAPCLKKLHRLMDQHKGR
FQDLNSHLGLDWSEDSEEEDGDWKLVSYQCQRLQEKRSEESRSWAERLAGFCSYLRQKHM
HLCREQRGFRRERRSQHALRKALVQAAREEPHQTAQLIQEQHQVTSAPSSTAVSLAGDDS
GLCQAVVKGENCRNSALPFTRHCFQHILQNRSQQLFSSCTARFADGAQCSIPVFDITHQT
PLCDEHAKKMDNFLRGDISRRTYHHHQQIQRHRPLKKAKPPALSKKHKKKGKRGTQRRPQ
KPIPPALPQGNLALPSILCLPSQPSGIRSPLTPDLSADEFPDDITNDISDIPHDLELNQE
DFSDVLPRLPDDLQDFDLFEGKNSELLPTSEEAEELVRVLQAMGSYPESLACLSGMAELG
PVEGVDCRSMPGGVVDLLSARLSAETLSSLELDPSLLHPSEDAFPPSPPSPQPPLTPPSS
VGHLTDSTYTQRQPHLLAKMEDSKADLANLPLGKDEDVSHGSWGVLALPLSDSSQFHSLI
ASDGLLMPTGLSTPCQPSSALSALPQSSQTRSTTTSPTSQTKHLPPPPTVQALWDPSRLT
AAP
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgtatgaaggcaaacacatccactactcggaggtggaccacaagcctctgtgctcatac
agtccaaagctctgcaagcagcgcaggctcaacggttatgctttctgcatccgccatgtg
ctcgaggaccgaactgctcccttcaggcagtgcgaatatgtagccaagtacaatagccag
cgctgcaccaacccaatacccaaggctcacgaccgcaagtattgtaatagtcaccttcag
gttatgggtgtccttcccaagaaggagcgaaagaagaaacaagataccatcgagtctctg
gccctcaatatcactgttccatccttggctttgaagacccataacggacttgagatttta
cctccatcccctccacctgccctggtttgtctacttccctcagatcccttttctttttac
aaggaagaaaaaatgttaaaatcaagtggcgcattcctgaagaaacctcaagaaactctg
aaccataaacagaagcagcaagatcacagcgtggacacaaaccatctcagaacttcctct
cttccttcaaccctttcacattcttgtctccctcctcttttaactggaagagccacacaa
acacccataaacccctcctccccccgcgcagcaactcctacagttcgttcaggttcatta
ttcaaaacctcatcaagtcttcaggacacccatcagggctcgaaagattcaactgataac
aagattaaactggaccttaatcatgcttttgacaaaaaggttgtccctgcagcttcaggg
atggcaccatgttgcgatgacacacaaagtcaattaatcaaaaaatgcactgttgccatg
caacagcaagctccgtgtttaaagaagttacatagattgatggaccaacacaaggggagg
tttcaagacctgaactcacatttagggcttgactggtcagaagacagtgaggaggaagat
ggcgactggaaactagtgtcatatcagtgccagagactacaagagaagcgctctgaggaa
agccggtcctgggctgagcgtttggcaggcttctgctcatacctgagacagaaacacatg
cacctttgcagggagcagaggggcttcaggagggagaggagatctcagcatgctcttcgt
aaagccctagtgcaggcagcaagagaagaacctcaccaaaccgcacagcttattcaggaa
caacatcaagtgacctccgcaccctccagcactgcagtatcgttggctggagatgactca
gggttgtgtcaggctgttgtgaaaggcgaaaactgcagaaactcagccttaccattcacc
aggcactgctttcaacatatccttcagaaccgttctcagcagctgttctcaagctgtacg
gctcgctttgcagatggagctcagtgttccatcccagtctttgacatcacacaccagacg
ccgctctgtgatgagcatgccaagaaaatggacaatttcctccgaggtgacatcagccgg
agaacgtaccaccaccaccagcagatccagcggcacaggccactgaagaaagccaagcct
ccagcactcagtaagaagcataagaagaaaggcaagagaggaacacagaggcgccctcag
aaacccatccctcccgctctgccccagggtaatctggcattgccttctatcctgtgcctg
cccagtcagccctctggcataaggagccctttaacacctgatttaagtgcggatgaattt
ccggatgacatcaccaatgacatcagtgacattccacacgatctggagttgaatcaggag
gatttctctgatgttcttcctcgactccctgatgacctgcaggactttgatctttttgaa
ggtaagaacagtgagcttttgcccacctccgaggaagccgaggaactggttcgcgtcctg
caggccatgggctcctacccagaatcccttgcatgtctaagcggaatggccgagctcggt
cctgtagaaggagtagactgtcgtagcatgccgggtggagtggtggatctactaagcgcg
cggctctccgctgagacactttccagcctggagctggaccccagtctgctccacccttct
gaagacgctttccccccatcaccaccatcacctcagccacccctcactcctccatcctcc
gtgggacatctcacagacagcacatacacacagaggcagcctcacctcctggccaagatg
gaggactctaaagcagatctggctaatctgccgcttggcaaagatgaagacgtctctcac
ggctcttggggcgttctcgctcttcccctcagtgattcctcccagtttcacagccttatc
gcctcggatggtctgctgatgcccacagggctttcaacaccctgtcagcctagttcggcc
ctctctgctttgcctcaaagcagccagactcgctccacaaccacatcgccgacatcccaa
accaagcaccttcctcctcctcccactgttcaagcactgtgggatcccagcagacttaca
gccgcaccgtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (55)   

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