KEGG   Danio rerio (zebrafish): 563454
Entry
563454            CDS       T01004                                 
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
  KO
K25731  VPS35 endosomal protein-sorting factor-like
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    563454 (vps35l)
Membrane trafficking [BR:dre04131]
 Protein recycling
  Others
   Retriever complex
    563454 (vps35l)
SSDB
Motif
Pfam: Vps35 DUF4699
Other DBs
NCBI-GeneID: 563454
NCBI-ProteinID: NP_001091651
ZFIN: ZDB-GENE-070521-7
Ensembl: ENSDARG00000020041
UniProt: A4VCH4
Position
12:11167887..11198776
AA seq 963 aa
MASVQWHSRSRKYDSEWQASRLEVSAVEFSDYHPLKAITVTDSKSRRGGRKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSLFAAASETPTLPHSVSAGELGRKRKEKEEEVGLDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDTSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCADPHPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKCGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAINWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPES
ERLSILNEAWKVITKVRSPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYPQLQSVIKKILTYFHDFSMLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEP
TRDPVILNALLHICKTMHDSVNALTLDDEKRSLALLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETGRVMKGNHSRKTAAFVRACAAYSFITIPSLTNIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSILPEVPRSISIEGKQRSSESFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKSLGRDEEVRRQGSLAFSLFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGICDTRTSVRTLEHIKHQAQQTDMSHFSDMTARLSLQ
SRA
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggcttcagttcaatggcactccaggagccgtaaatatgacagtgagtggcaggcgagt
cgtttggaggtttcagcagtggagttcagtgactatcatccactcaaagccatcacggtg
acagactctaaatctcggcgtggaggacgaaaaggcagcacttcctcctcatcttcctcc
tctagttcagtggctcctgatccgctcagctccatgttggatggaacagaccctttgtct
ctctttgctgcagcatccgagactccaactctcccacacagcgtctctgctggggagtta
gggcggaaacgtaaagaaaaagaggaggaggtgggcttagactttgagccatggtcgtct
aaacgtggagagatcctgtctagattcaccaccacggagaaactgtctataaatcttttc
atgggctcagacacaagtaaagcgtccagtcccagctctgctgtctcagagaaggtgcgc
actcgtctggaggaactggatgacctggaggagggctcacagagggagctgttgaatctg
tctcagcaggattatgtgaaccgcattgaagagctcaaccagtctctgaaggaggcgtgg
ggttcagaccagaaagtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtaattcagttttaccccagcaagtttgtgcttatcacggacatacttgac
acattcggtggtcttgtgtatgacaggatctggtccatgtgtgctgatcctcatcctcta
ccagagtcattctctgctgatgatgtgaatgacacggccaaagagacctgcctcaactgg
ttctttaaaatcgcctccatcagagagctcgtccctcgactatatgttgaagctgctctt
ctgaaatgcaaccgcttcttgacaaaatgtgggattcaggagactctgcagagactaaca
gctatgatcagaggaataggagacccgctggtagctgtatatgcaagggcctatttatgc
agggtggggatggaggtggcgccgcatctgaaggacagtctcaataaaaatttcttcgat
ctgctggcctcgtttcgtcagattcatggtgacagtgtgcagaatcagctggtgttgcag
cgagtggagattcccgtttatctgactctctattctcctgccataaactggatcctgcag
tgtgtggcctatagagcacctgaggttctgctaactgagatgatggacagatgcaagaag
ttaggcaacaatgctcttctgctaaactctgtcatgtgggcgtttcgggctgaatttgtt
gcaacgagagcaacagacttcattggcatgatcaaagactgtgatgaagctggatttccc
aagcacttgttgtttgcatctctgggccgcagtctgtcctgtgctgaccctccagagagc
gagagactctccatactcaatgaagcctggaaggtcatcactaaagttcgcagcccacgg
gattatatcaactgtgctgagatctgggtcgagttcacttgccgtcacttcacgaaacgg
gaggtgaacactgttcttgctgatatcatcaaacacatgactccagacagagcttttgaa
gatgcatatccacagttgcagtcagtgattaagaagatcctcacctacttccatgatttc
tcaatgcttttttcgatggagaagtttctgccctttttggacatgttccagaaagacagt
gtgagggtggaggtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaacca
acgagagacccggttattctcaacgcactgctgcacatctgtaagaccatgcacgactct
gtcaatgctttgactttagatgatgaaaaaagatctctggctctgctgatcaatggtttt
attcgtatggtgtcttttgggagggactttgagcagcagttgagtttctgtgtggaagcg
cgagcgactttctgtaatctagagcctgtcatcatccacctcatacatacggtgaatcag
ttagccatggagacgggtcgtgtgatgaaaggcaatcactcacgtaaaacagctgctttt
gtcagggcatgtgccgcctacagcttcatcaccattccatccctcacgaacatcttcagc
cgcctcaacctctatctgctgtctggacaagtagcgctggccaaccagtgtctgtcccag
gcggacgcatttctaaaggcagcagtcagtattttgccagaagtcccgcgcagcatcagc
attgagggtaaacagcgatcctcagaatcctttctgctagacttcatcaacaacttcctc
tccacactgctcgtagtgccggatcatccggagcagggtgtgctgtatctggtgcgagga
cttttaaatatggttcaggattacacctgggaagacaacagtgatgccaaagtccgtgtc
tacatcagcgctttaccattactagcagcaatgagccaagagagctacctctacaccatt
cctaaagtggattcaaatgaaactctgtatggaggagatcccaagttcatcgcagagatc
aacaagctgtgtgagactctgatcgggcaggttctggatcatttaaagagtctgggtcga
gacgaggaagtgcgcaggcagggcagtctggctttctctttgtttggctgtctattggct
catggggatctgcggaacaacaaactcaaccagctggctgtcaacctgtggaacctcagc
cacaaacacggcatctgtgacacgcgtacatccgtccggactctggaacacatcaaacat
caggcgcagcagactgacatgagccatttctctgacatgacagcgcgtctgtcactgcag
tcccgagcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system