KEGG   Danio rerio (zebrafish): 565736
Entry
565736            CDS       T01004                                 
Symbol
usp12a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 12A
  KO
K11842  ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dre01002]
    565736 (usp12a)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    565736 (usp12a)
Enzymes [BR:dre01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     565736 (usp12a)
Peptidases and inhibitors [BR:dre01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   565736 (usp12a)
Ubiquitin system [BR:dre04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    565736 (usp12a)
SSDB
Motif
Pfam: UCH UCH_1 Peptidase_C98 DUF5740 NapB CEBP_ZZ
Other DBs
NCBI-GeneID: 565736
NCBI-ProteinID: NP_001077025
ZFIN: ZDB-GENE-060228-3
Ensembl: ENSDARG00000078109
UniProt: A4FUN7
Position
24:complement(21600320..21620275)
AA seq 371 aa
MEILMTVSKFASFCTMGANASALEKEIGSEQFPVNEHYFGLVNFGNTCYCNSVLQALYFC
RPFREKILAYRSQPRRKENLLTCLADLFHSIANQKRKVGVIPPKKFITRLRKENELFDNY
MQQDAHEFLNYLLNTIADLLQEERKQDKQNGKLANGTLDSQNNNSTPPSTTWVHEIFQGT
LTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSK
QEAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERL
YDLVAVVVHCGSGPNRGHYIAIVKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSE
SGYILFYQSRD
NT seq 1116 nt   +upstreamnt  +downstreamnt
atggaaatcctaatgacagtttccaaatttgcctctttttgtaccatgggcgccaatgcc
tccgctttggagaaagagatcggctcggagcagttcccagtcaacgagcattacttcgga
ttggtcaacttcggaaacacctgctactgtaactctgtgctccaggctctgtacttctgc
cggccgtttcgggagaagatccttgcgtacaggagtcaaccgcgccgcaaggagaacctg
ctcacctgcctggctgacctgttccacagtatagccaaccagaagaggaaagttggcgtt
ataccgccgaagaagttcattacgcgactacggaaagagaatgaactgtttgataactac
atgcagcaagatgcacatgagtttctcaactacctgctgaacactatagcagatctgctc
caagaagagcgcaaacaagacaagcagaatggcaagcttgccaacggcacactcgattcc
cagaacaataacagcaccccaccctccaccacctgggttcatgagatcttccagggcacg
ttgaccaatgagacgcgatgcctcacctgcgaaacgataagcagcaaagatgaggatttc
ttggatttgtcagtggacgtggagcagaacacttcaatcacacactgtctcagaggtttc
agtaatacagagacgttgtgcagtgaatataaatattactgtgaggaatgcagaagtaaa
caggaggcacacaaacgaatgcgggttaagaaacttcccatgatcctcgccttgcacttg
aagagatttaaatacatggagcagctgcagcgctacactaagctaagctaccgtgtggtc
ttccctctggagctccgcctctttaacacctctggtgacgccaccaatcccgagaggctt
tacgacctggtcgctgtggtggtgcattgtggcagtggtccaaaccgaggacactacatc
gcaattgtaaaaagtcatgatttctggctactgtttgatgacgacattgtagagaaaatc
gatgcccaggcgattgaagagttctacggattaacctcggaaatttccaagaactctgag
tctggctacatcctgttttaccagtccagagactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (49)   

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