KEGG   Danio rerio (zebrafish): 566411
Entry
566411            CDS       T01004                                 
Symbol
grin3ba
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
  KO
K05214  glutamate receptor ionotropic, NMDA 3B
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04020  Calcium signaling pathway
dre04080  Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    566411 (grin3ba)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    566411 (grin3ba)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:dre04040]
    566411 (grin3ba)
Ion channels [BR:dre04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   566411 (grin3ba)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor
Other DBs
NCBI-GeneID: 566411
NCBI-ProteinID: XP_021323058
ZFIN: ZDB-GENE-070912-354
Ensembl: ENSDARG00000005364
UniProt: A0A8M9P9F6
Position
2:26060309..26157175
AA seq 1118 aa
MNLVLFRFLAYLHVGLQVALQMFIYPCHLHPQPCHILARIGHTVRLGALLPTRQQSRIQG
ALNRALVHLRQSGNNFLPYNLSLEVLSREPLNGDPESMFRCVCQDIVVQGVSAVLAFPQS
HEELIQVEFMSSFLEIPFISIIEQGEPLKTQNRFHLQMMTRMPPSGLSDLLLAVLLRGGW
QGGAATVCPGGGNTGMLEELQQRGHLGLDGAHWHLWETLNLSRLEENISEDKVMELLSQL
LSRTPSAPASSVVLFGSDPECTATVLHCAHQLSGTLPPMHWIMGYPLSLDSLHSIGSPLG
LMAYGEVNRKPLNFYIRDTLQLIGRAVYAATMVRPDLALIQNMVNCFDKPNKHELPSSGQ
YLARFLSNTSFTGLTGPVRVERSFSRVLTSQRFHIWSLQRDPLGQPSWVTVASWQSGRLE
LEEQGLWPGVTQHQREDGPGIRLGGRWQAGLPVAGSRLRVVTLVEHPFVFTREVDEEGQC
PAGQLCLDPQTNNSEVLNQLFRELEQTNSSSLPTDMRKCCYGYCIDLLEKLAEDMHFEFD
LYIVGDGKYGAWKGGRWSGLVGDLLSGVADMAVTSFSINSARSRVIDFTSPFFSTSLGIL
VRSKDTAAPIGAFMWPLHWSMWVGIFVALHITALFITLYEWNSPFGMTPHGRNRIRVFSY
SSALNLCYAILFGRTVASKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEE
VSGIHDVKLHHPSLGFRFGTVRESSAEDYVKKSFPEMHEYMRRFNKPTTPDGVSTLKTDP
PQLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTRNVSEYVSRYKS
DGYMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCVGVAGALLTLLGEHAFF
RFILPHLRHQQRFKYWLHTSQKIHRAINMGCDDERKSEAESSDRCPTLCLSENCNLHRLP
PSSSSPPSTSSTSTTTTKWNNQSVKAGREAKEQNKRVHFNLETLNSYQLQAPPHGAERGR
RGLVGSPPTQLCSNGGPNPSLSLVLSPLTCSGHSTPWEEELHELQGRIEEFRGQLRAALA
RRAELQRTLVRQRLSQSQNSSSYNPNTNTLTKDINRGR
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgaatttagtgctcttcagattcttggcataccttcacgttgggctccaggtcgctctc
cagatgtttatttacccttgtcatctgcatccccagccctgtcacatcctggcacgcatt
gggcacaccgtgcgcttgggtgcgctcctgccgacccgccagcagtccaggatacagggc
gccctcaaccgcgccctggtccacctccggcaaagtgggaacaacttcttgccctacaac
ctgagcttggaagtattgtcccgagaaccgctcaatggagacccggagtccatgttcagg
tgcgtgtgccaggatatcgttgttcagggagtctcggctgtgctcgcgttcccccagagc
cacgaggagctcatacaagtggagttcatgtcctcgtttttggaaatacccttcatcagc
atcattgaacagggtgaacctcttaagacacagaaccgcttccatttgcagatgatgact
cgaatgcctccttcagggctctcggacctgcttttggctgtgttgctgagggggggctgg
cagggtggagcggcaactgtctgtccgggaggtgggaatactggaatgctggaagagctt
caacagcgtggtcacctaggtttagacggagcccactggcacctttgggagactctcaat
ctgtccagacttgaggaaaatataagcgaagacaaggtaatggagctcctatcgcagctc
ctcagcaggactccttctgctccagcgtcctccgtggtgcttttcggctccgaccctgaa
tgtacagccacagtgctgcactgtgcccatcagttgagtggcacattgccccctatgcac
tggatcatgggatacccgcttagtctggattctctacactctattggctccccgcttggt
cttatggcttatggggaggtcaatcgcaaacccttgaacttctacattagggacaccctg
cagctcattggcagagctgtatatgctgctaccatggtgagaccagatttggcactcatt
caaaacatggtaaactgtttcgacaagcccaataaacatgagctaccctcctccggacag
taccttgccaggttcttgtcgaacacttccttcactgggctgacaggccctgtgcgagta
gagcgctctttctccagagtccttacctcccaacgctttcacatttggagtctccagcgg
gatcctctaggccagccaagttgggtgaccgtggcaagctggcagtcgggccgactggaa
ctggaggaacagggcctgtggccaggagtgacccagcaccagcgggaggatggcccaggg
atcagacttggcggacgctggcaagcaggactcccagtggcagggagcagattgcgggtt
gtaaccttagtcgagcacccgtttgtgttcacaagagaagtggatgaggagggccaatgt
ccggcagggcagctgtgccttgaccctcaaaccaacaactcagaagtcctcaaccagctg
ttcagagagctggagcaaaccaacagcagctccctgccaactgacatgcggaaatgctgc
tacggatactgcattgacctgttggagaagttagctgaggacatgcacttcgagttcgac
ctttacattgtaggcgatgggaagtacggagcatggaaagggggtcgatggtctgggctg
gtgggtgacctgctcagtggtgtggcggatatggctgtcaccagctttagcatcaactca
gctcgaagccgagtgatagacttcactagcccctttttctccaccagtttggggatcctg
gtgcgaagcaaggacacagctgcacccattggtgccttcatgtggccccttcactggtcc
atgtgggtgggcatctttgtggcactgcatattacagcgcttttcatcactctatatgag
tggaacagtcccttcggcatgactccacatggacgcaatcgcattagggtcttctcatac
tcgtctgctcttaacctctgctacgccatcctgttcggccggactgtcgccagtaagact
ccaaagtgctggacaggccgcttcctcatgaatctttgggccatattttgcctcctggtg
ctgtcaagttacacagccaacctagcagctgtcatggtgggggagaagacctttgaggaa
gtgtcaggaattcatgatgtcaagctccatcacccatccctggggtttcgcttcggcaca
gtgcgtgagagcagtgctgaggactatgtgaaaaagagcttccccgagatgcacgagtac
atgaggcgcttcaacaagcccaccactccggatggagtctctacactcaagacagatccc
cctcagcttgacgccttcatcatggataaagctttgctggactacgaggtatccatagac
gcagactgcaaactcctgactgtaggaaaaccgtttgctattgaaggttacgggatcggt
ctgccccagaactcccctctcacacgcaacgtctccgagtacgtcagccgctacaagtct
gacggttacatggacatgcttcacgacaagtggtataaagtggttccctgtggcaagagg
gtttttgctgtgacagagactctgcagatgggcatccagcatttctctgggctgttcgtg
ttactgtgtgtcggggtagcaggagctttactcacacttctgggggaacacgctttcttc
agattcatcctgcctcacctccgtcaccagcagaggttcaaatactggctccacaccagc
cagaaaatccaccgtgcaataaatatgggttgtgatgatgaaaggaagtcagaggctgag
agcagtgacagatgtcccaccttgtgcctgtcagagaactgtaatctccaccgcctgccg
ccctcgtcctcttctccgccttccacctcctccacgtccaccactacaaccaagtggaac
aatcagagcgtcaaggctggtcgagaggccaaagagcagaacaagcgtgtccacttcaac
ctggagactctcaacagctaccagctccaagctccgcctcatggggcggaaagggggcga
agagggttggtgggaagcccacctacccaattgtgttccaacggtggcccgaatcccagt
ctcagcctggtgctttcacccctgacctgctcaggacactcaacgccatgggaagaggag
ctgcacgagcttcagggaaggatcgaggagtttcgtggccagctcagggcagctctggct
aggcgagccgagctccagaggaccctagtcagacagcggctcagtcagtcccaaaacagc
tcctcatataatcccaacaccaacaccctgaccaaagacatcaacagggggaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (37)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (49)   

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