KEGG   Danio rerio (zebrafish): 569404
Entry
569404            CDS       T01004                                 
Symbol
pdlim4
Name
(RefSeq) PDZ and LIM domain protein 4
  KO
K23353  PDZ and LIM domain protein 1/2/3/4
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    569404 (pdlim4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:dre04990]
    569404 (pdlim4)
Domain-containing proteins not elsewhere classified [BR:dre04990]
 LIM domain-containing proteins
  PDZ-LIM family proteins
   569404 (pdlim4)
SSDB
Motif
Pfam: DUF4749 PDZ LIM PDZ_6 PDZ_2
Other DBs
NCBI-GeneID: 569404
NCBI-ProteinID: NP_001036161
ZFIN: ZDB-GENE-070308-5
Ensembl: ENSDARG00000068973
UniProt: Q0PWB9
Position
21:complement(43738398..43801493)
AA seq 349 aa
MSHTVTLSGPSPWGFRLVGGRDFSTPLTISRITPASKAAQSNLSPGDTILAINGESTESM
THMEAQNRIKACTDQLVLAICRSGKAWSPTGMEELKTSPFSPTLESDSQTFRPISSGYSP
TPKSPSPKSPITGAVPYNNGGSRPVYNNPAGLYSHNNGNGALPKQMSGLSLGSPHSFSPE
PPVNSSGNRNGFDTQSDVYRMLLDYEEPVSAPKQSGSFKYLQGILEAEDGGVSPVDRSGV
RGLRSPVKSPVPKLGSPITAPLAPIPGLQNLPQCTRCANGIVGVIVKARDKLYHPDCFMC
DDCGLNLKQRGYFFIDDNLYCETHAKARVQPPEGYDVVAVYPNSKVELV
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgtctcacactgtgactctcagcggtccctcgccctggggttttcggctggtgggtgga
cgagacttcagcacaccgctcaccatttccagaataacacctgcgagtaaagcggcgcag
agcaacctgagtcctggagacaccatcctggccatcaatggagaaagcacagagagcatg
acgcacatggaggctcagaaccgcattaaagcctgcacagatcagctggtgctggccatc
tgcagatctggaaaggcttggtctccaactggaatggaagaactcaagacaagtccattc
agcccaacactggagtctgattcacagactttccgaccaatcagcagtggctacagtcca
actcccaaaagtccgtcgcccaagagcccaatcactggcgctgtgccctacaacaatggc
ggatccagaccagtgtacaacaacccagcaggactttattcccacaacaatggcaacggt
gccctgccgaagcagatgtcaggcctcagcctgggctctcctcacagttttagccctgag
ccgccagtgaattcatcaggcaaccgcaacggtttcgacacacagtctgacgtctacagg
atgctcctggactatgaggaaccggtttcagctcccaaacaatccggctcctttaaatac
ctgcagggaatcctggaagctgaggatgggggagtctcgccggtggacagatctggggtc
agaggcttgcgttcccctgttaaatcacccgtgccgaagctgggcagccctattacagcc
cctctggcacccattcctggcctacagaaccttcctcagtgcacacgctgcgcaaacggc
attgtgggagtcatcgtgaaggcccgagacaagctctaccaccccgactgcttcatgtgt
gacgactgcggcctcaacctgaagcagagaggatatttcttcatcgatgacaatctgtat
tgtgagacccacgccaaggcccgcgtccagcctcctgagggctacgacgtagtggccgtt
tatcccaactctaaagtggaactggtctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (30)   

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