KEGG   Danio rerio (zebrafish): 570158
Entry
570158            CDS       T01004                                 
Symbol
alkbh5
Name
(RefSeq) RNA demethylase ALKBH5
  KO
K10767  mRNA N6-methyladenine demethylase [EC:1.14.11.53]
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    570158 (alkbh5)
Enzymes [BR:dre01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.53  mRNA N6-methyladenine demethylase
     570158 (alkbh5)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     570158 (alkbh5)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-GeneID: 570158
NCBI-ProteinID: NP_001070855
ZFIN: ZDB-GENE-061013-602
Ensembl: ENSDARG00000063003
UniProt: Q08BA6
Structure
Position
1:8508753..8516591
AA seq 352 aa
MAGFTDLREKLKSMTPHRDKVFEYSNGEKRKYRESDDDESEYEERRDAEARRVKSGIKQA
SIFTLEECARIEAKIDEVVAKADKGLYREHTVDRAPLRNKYFFGEGYTYGAQLEKRGPGQ
ERLYSKGEVDDIPDWVHELVIDRLVTHGVIPEGFVNSAVINDYQPGGCIVSHVDPIHIFE
RPIVSVSFFSDSALCFGCKFLFKPIRVSEPVLHLPVRRGSVTVLSGYAADDITHCIRPQD
IKERRAVIILRKTRADAPRLDSNSLSPSIVSPKRRHILKAKRSHRKADPDAAHRPRVLEM
DKELQRRSLSSRQRRHDDGSSENSWRRADDREPAARYTHDHAPTRRVKMRRH
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggccggatttaccgatctgcgagagaagctcaagtcgatgacaccgcacagggacaaa
gttttcgagtacagcaacggcgagaagcgcaaataccgcgagtcggatgatgacgagagc
gagtacgaggagcggcgggacgcggaggcgcgcagagtcaagagcggcattaaacaggcg
agtatcttcacgctggaggagtgcgcgcgcatcgaggccaagatagacgaggtggtcgcc
aaggcagacaaggggctgtaccgggagcacacggtggaccgggcgcccctgcgaaacaag
tactttttcggggaggggtacacgtacggcgcgcagctggagaagcgcggacccgggcag
gagcggctgtactccaaaggagaggtggacgatatcccggactgggtgcacgagctggtc
atcgatcgcctcgtgacgcacggtgttatcccggagggttttgtaaatagcgctgtgatc
aatgactaccagcccggaggctgcatcgtgtcccacgtggatcccatccacatctttgag
cggccaatagtgtccgtgtccttcttcagcgacagcgcgctctgcttcggctgcaagttt
ctcttcaagccgatccgcgtgtccgagcccgtgctgcacctgcccgtgcgccgcggcagc
gtcacagtcctcagtggctacgcagctgatgacatcacacactgcatccgcccacaggac
atcaaggagaggcgagccgtcatcattctgagaaaaacaagggcggatgctcctcgccta
gactccaactctctgagtccatccatcgtctctcctaaaagacggcacatcctcaaagcc
aagcgctcgcatcgcaaggctgaccccgatgctgcacacaggcctcgtgttttagagatg
gacaaagagctgcagaggcgttcgctctcgtcccggcagagacgccacgatgacggcagc
tccgaaaactcctggaggagagcagacgacagagagcccgccgcgcgctacacacacgat
cacgcacccacacggcgagtcaaaatgagacgccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
3D Structure (2)   
   PDB (2)   
Protein domain (1)   
   Pfam (1)   
All databases (27)   

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