KEGG   Danio rerio (zebrafish): 58024
Entry
58024             CDS       T01004                                 
Symbol
coil
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    58024 (coil)
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    58024 (coil)
SSDB
Motif
Pfam: Coilin_N DUF5320
Other DBs
NCBI-GeneID: 58024
NCBI-ProteinID: NP_571587
ZFIN: ZDB-GENE-000330-8
Ensembl: ENSDARG00000040070
UniProt: B0S7K8
Position
3:complement(36119718..36127239)
AA seq 532 aa
MATSSLNTARVRLYFDYPPPATPECRMCWLLVDLNKCRVVADLSSIIKEKFGYSRKTILD
LFIEECYLPSAESIYIVRDNDSVRVKVSCPVQVNGTEAEAQNSKSKKRGREDETQTCDGL
SKKQKQDNAQMNGLGPDEDEKKKKKKKKKKKKKEVKESITKPATPQKSTAALSTKTKSKS
TSAVASSDKTNRTKNHKPASSSSDSSEDESQKKAPPPKPKPSKKPCVAAQKESTDSSSSD
ETEKLKSSIPLPITPKPSSSTSKLQTPQQRESSSSSSSSPIIKNSQAAGQSSSTTQKSLQ
PVSSSVPKKPQDEGESSSSDESEIELVIKKPNLQGLGLRIAGVSPGFGEAAGRGRGNAQG
QERGRGRGANRGSGRGGFSRARGTPWKQNFHYSYENEERQKPEDSLTNESFILQNPPELA
PKRDYATLPLLAAPPAVGQKIAFKLLELTENYTPEVSDYKEGKILAFNPQTKVTELELLS
RPQAPAEPGKFDLVYQNPDGSERVEYAVTQGSQLTERWDSLLEPRLIVENAK
NT seq 1599 nt   +upstreamnt  +downstreamnt
atggccacctccagcctcaacactgccagggttaggttgtattttgactatcctcctcct
gcaacaccagagtgtcggatgtgttggttgctggtggacctgaacaaatgccgagttgtc
gcagatctttccagcatcataaaggaaaagtttggctacagccgcaagactattttagac
ctgtttattgaggaatgctacctgccttctgctgaaagtatttatatagtacgtgataat
gacagtgtaagagtgaaagtctcctgtcctgttcaggttaatggaaccgaggctgaagca
caaaactctaaaagcaagaaaagaggaagagaggatgagactcagacctgtgatggtcta
agtaaaaaacagaagcaagacaatgctcaaatgaatggtttgggacctgacgaggatgaa
aaaaagaagaaaaagaagaagaagaagaaaaagaaaaaagaggtgaaagagtccatcacc
aaacctgctactccccaaaagagcactgcagccctttctactaaaaccaaaagtaaaagc
acctctgctgtggcatccagtgacaaaacgaatcgcacaaagaatcataaaccagcatca
agctcttcagacagcagtgaggatgagtctcagaaaaaggctcctccaccaaaacccaaa
cctagcaagaagccttgtgtagctgcacagaaagaaagcacagattcatcatcttcggat
gaaacggagaaacttaaaagcagcatcccgcttcccattacacctaaaccatccagcagc
acttcaaaacttcagacacctcagcagagagagagctcatcatcgtcgtcatcttcacct
atcatcaagaactcacaagctgcaggtcaatcgtcctcaaccactcaaaaatcacttcag
ccggtctcatcttctgtgcctaaaaaacctcaggatgagggagagagctccagctctgat
gagagtgaaatagagcttgtgattaaaaaaccaaacctgcaaggactggggctgagaatt
gcgggtgtgagccctgggtttggtgaagctgcaggcagaggcagagggaacgcacagggg
caggagagaggcagagggcgaggggcgaatcgtggcagtggcagaggaggtttcagcaga
gccaggggaacgccgtggaaacaaaactttcattacagctatgaaaatgaagagagacag
aaaccagaagattctctgaccaatgaaagttttattttacagaacccacctgaattagct
cccaaacgggactacgctactttacctttgctggcagctcctcctgcagtgggtcaaaag
attgccttcaagctgttggagctgacagagaactacacaccagaggtgtctgattataaa
gaaggaaagattcttgcattcaatcctcaaacaaaagtgacagagctggaactgctctct
cggcctcaagctccagctgaacccggaaagtttgacttggtctaccagaatccagatggc
tcagagagagtagagtatgctgtcacacagggatcacagctgactgagcgctgggattct
cttctggagccgcgactcattgtggagaatgccaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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