KEGG   Danio rerio (zebrafish): 777766Help
Entry
777766            CDS       T01004                                 

Gene name
ubc
Definition
(RefSeq) polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03320  PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    777766 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    777766 (ubc)
Ubiquitin system [BR:dre04121]
 Ubiquitins and Ubiquitin-like proteins
  Ubiquitins
   777766 (ubc)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Ubiquitin_5 Sde2_N_Ubi
Motif
Other DBs
NCBI-GeneID: 777766
NCBI-ProteinID: NP_001071272
ZFIN: ZDB-GENE-061110-88
Ensembl: ENSDARG00000102632
Vega: OTTDARG00000030831
UniProt: F1QHN6
Position
10
AA seq 533 aa AA seqDB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGK
NT seq 1602 nt NT seq  +upstreamnt  +downstreamnt
atgcagatctttgtgaagacgctgactggtaagaccatcaccctcgaggtcgagcccagc
gacaccattgagaatgtcaaggctaaaattcaagataaggagggcattcctcctgaccag
cagcgtctgatcttcgctggaaaacagttagaggatggacgcaccctgtccgactacaac
atccagaaagagtccaccctccacctggtgctccgcctcaggggtggcatgcagatcttt
gtgaagacgctgaccggcaagaccatcactctagaggtggaaccaagcgacaccattgag
aacgtcaaggctaaaattcaagataaggagggcatcccacctgaccagcagcgtctgatc
tttgctggcaagcagcttgaagatggacgcaccctgtccgactacaacattcagaaagag
tccaccctccacctggtgctgcgtctgagaggcggtatgcagatcttcgtcaagactctg
acaggaaaaaccatcactcttgaggtcgagcccagtgacaccattgagaacgtgaaagcc
aagattcaagataaggagggcatcccacctgaccagcagcgtctgatctttgctggcaaa
cagcttgaagatggacgcaccctgtccgactacaacatccagaaagagtccaccctccat
cttgttctccgcctcaggggcggcatgcagatcttcgtgaagacgctgactggaaaaacc
atcactttggaggtcgagcccagcgacaccattgagaacgtcaaggctaaaattcaagat
aaggagggcatcccacctgaccagcagcgtcttatctttgccggcaagcagcttgaagat
gggcgcaccctgtctgactataacatccagaaggagtccaccctccacctggtgctccgc
ctcaggggtggtatgcagatcttcgtgaagacgctgactggtaagaccatcactcttgag
gtcgagcccagtgacaccattgagaacgtgaaagccaagattcaagataaggagggcatc
ccacctgaccagcagcgtctgatctttgccggcaagcagcttgaagatggacgcaccctg
tccgactataacatccagaaggagtccaccctccatcttgtgctgcgtctgagaggtggt
atgcagatcttcgtcaagaccttaactggcaagaccatcactcttgaggtggaaccaagt
gataccattgagaatgtgaaggcaaaaatccaggacaaggagggcatcccacctgaccag
cagcgtctgattttcgctggcaagcagcttgaagatggacgcaccctgtccgactacaac
atccagaaggagtccaccctccacctggtgctccgcctcaggggcggcatgcagatcttc
gtcaagacgctgactggcaagaccatcacactcgaggtggaaccaagcgacaccattgag
aacgtgaaggccaaaatccaggataaggagggcatcccacctgaccagcagcgtctgatc
ttcgctggcaagcagcttgaagatggacgcactctgtccgactacaacatccagaaggag
tccaccctccacctggtgctgcgtcttcgtggcggcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6109)   
   KEGG ORTHOLOGY (1)   
   RefGene (6101)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   UniGene (1)   
   Ensembl (1)   
   OC (1)   
   VEGA (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (7)   
   Pfam (7)   
All databases (6135)   

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