KEGG   Danio rerio (zebrafish): 792998
Entry
792998            CDS       T01004                                 
Symbol
pex6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
  KO
K13339  peroxin-6
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    792998 (pex6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    792998 (pex6)
Membrane trafficking [BR:dre04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    792998 (pex6)
SSDB
Motif
Pfam: AAA AAA_lid_3 AAA_16 AAA_22 ABC_tran AAA_33 AAA_5 AAA_18 RuvB_N DUF815 AAA_7 Mg_chelatase Rad17 nSTAND3 RNA_helicase AAA_28 TIP49 AAA_29 TsaE AAA_25 AAA_17 AAA_2 AAA_14 Cytidylate_kin2 IstB_IS21 bpMoxR Vps4_C AAA_24 Parvo_NS1 PhoH SLFN-g3_helicase
Other DBs
NCBI-GeneID: 792998
NCBI-ProteinID: XP_001332652
ZFIN: ZDB-GENE-081104-252
Ensembl: ENSDARG00000070958
UniProt: F1QMB0
Position
22:complement(38000559..38035805)
AA seq 1071 aa
MATPMKLRCLADFPPHVHPLHVLINKSQFTQKFPEHTGATHALLLSLSDRQSRSNPGFLV
CAHLTPEEEEPDVNIDTRLAVSVSRSFLKHYGLREQSWGTLRPQSLLPLKKIVIGARTKP
SFKWASSEQFSNGLLILASCPEQVLLARQGDLLLVPCQHLLAEEEEEVLWEVQVLECTPV
RQGLITVDTCVVLSDCRDLDVFLSSTAALCRPPPSAPFVSDFAQCANSLSSSLMSSRVCL
DFSAFIEALECRLDVRVVETSDLLKPGGIVSALNEEEVDVDCCVFVSRSLLVKLGVFNGE
WVIASVPGEKVKRSPAVQSPVLGEGEGGKIQHQKRAGRVHLVCIKAFDTGRREDKDVAVG
FVSVVQWFNLSDGMAVPVGNKTIKIKRWNKASSHTDPQISASACRCSSPPFAKELHIETI
ISPDYSALGLFSSVLHTHFSKPRLVQQGNILAVPTQGHPELMENGSEGVLRWPVLYFRVK
QACGFSSEEEEASSYLADSSHTSLYMGGSAHSLCPYSVLPEASSFWTSLSPPGLSSTVEK
LITIIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTA
AASEAKIKSVFERAELHHPCLLLLRNLQLLGQSRDGAETDCRVAATLCQLIAAVHTSVVV
VGSVSSQHELPSDVMAAFVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAG
FVLGDLCALLTNAGKAAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEA
HSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLRRSGLLLYGPPGTG
KTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLA
PNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVY
VGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRK
ISRITEGVDSELSSLTLCSEDFSEALSGLQPSVSEQQISRYQLLQQKLSSR
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggcgacccccatgaagctgcggtgtctcgccgactttccgccacacgttcatcctctt
cacgtgcttatcaacaaatcacaattcactcaaaagttcccggagcacaccggagctacg
cacgcgttgttactctcactttcagaccgacagtctcgctcaaatcctggctttttagtg
tgcgcgcacttgactccagaagaagaggagccggatgtaaacattgacacgcgcctcgcg
gtttccgtgagcagatctttcctcaaacactacggtttaagggaacagtcttggggaaca
cttcgcccacagtctctgctgcctttaaagaagatagtgatcggcgctcggaccaaaccg
agctttaaatgggcttcttcggagcagttctccaacgggctgctcatcctggcgtcctgc
ccagagcaggtcctgctggcgagacaaggagacctcctgctggtgccctgccaacattta
ttggccgaagaggaagaagaagtgctgtgggaggtgcaggtgctggagtgcacacctgtc
cgccagggcctgatcacagtggacacctgtgtggtgctgtccgactgcagagatctggat
gttttcctctcctccaccgctgcactgtgcagacctccaccctcagctccgtttgtgtcg
gatttcgcgcagtgtgccaacagtctgagcagctctctgatgagcagcagagtttgtttg
gacttcagtgctttcattgaggctcttgaatgcaggctggatgtgcgggtggtcgagaca
tcagatctcctgaaacctggagggattgtgtctgcgttaaatgaagaagaagttgacgtt
gactgctgcgtgtttgtgagcaggagtttgctggtgaagctgggggtgtttaatggggag
tgggtcatcgcctctgtcccgggagagaaggtgaagaggagtcctgcggtgcagagtcct
gttctgggggaaggagaaggcgggaaaattcagcatcagaagagagcaggacgtgttcat
ctggtgtgcattaaagcctttgacaccggcagacgggaagataaagatgttgctgtgggc
ttcgtttccgttgtgcagtggttcaacctgtcggatgggatggcagtgcctgttggaaat
aaaaccatcaaaataaagaggtggaataaagcttcatctcacacagaccctcagatctcc
gccagcgcatgcagatgttcatctccgccgtttgctaaagagctgcacatcgaaaccatc
atttctccagactacagcgctctcgggctcttcagcagcgtccttcacacacacttcagc
aaacccaggcttgtccagcaggggaatattttggccgtcccgacacaaggacatcctgag
ctcatggagaacggctctgaaggcgtcctcaggtggcctgtgctgtatttcagggtaaag
caggcgtgtgggttttccagcgaggaggaagaggcttcttcatatctggcagattccagt
cacacttcgctatacatgggaggctccgcccacagtctgtgcccatactctgtgctgccg
gaagcttcatctttctggacgagtctcagtcctcctggtctctccagcactgtagaaaaa
ctgatcaccatcatccagcctcacctcaacgaaagcactttaattttaaaaagaggctgt
tcgattcttctgatgggtccaaatggcagtggtaaatttaccgcggtgagagcggttagc
aggaggctacatctgcatctgattaaggtggactgtgtgactctgtgtgccgacaccgca
gctgccagcgaggctaagatcaagtctgtctttgagagggcggagctccatcacccgtgt
cttctgttgctaagaaacctgcagctgctcggccagtcacgagacggcgctgagaccgac
tgcagggtcgctgcaaccctctgccagctcattgcagctgttcataccagtgtggtggtg
gttgggtcggtgagcagccagcacgagttaccctcagatgtgatggcggcgtttgtccac
caggtggcgatagagagcctgtcggaggaccaacggaggatggtgctctccagcctcagc
gaggacctgctgttggggaaagacgtcaatctgggcaggatagccaaacagaccgctgga
tttgttttaggagatctgtgcgcacttctgaccaatgctggaaaagctgctcacaggaga
cttgtggagacgtattttccagaagcagtgagtgaacaggaggaggaggatctgtgtgtt
tctggggtcagtgttacctctgaggacttcagcgcagcgctggacgtcctgcaggaggcg
cattcacaagctattggagcacctaaaatcccggcggtaagctggcaggacgtcggcggt
ctccaacaggtgaagaaggagatcctggacaccattcagcttcccctggagcatccggag
ctgctgtcgctgggcctgcggcgctccggactcctgctctacgggccgccaggcaccggg
aaaaccctgctggccaaagctgtggccactgaatgcaccatgaccttcctcagtgtgaag
ggtcccgaactcatcaacatgtatgttggtcagagtgaagagaacatcagacaggtgtcc
agtaaggccagaagtgcggctccctgcatcatcttttttgatgaactggactctttggct
cctaatcgaggacacagtggagattcgggaggagtgatggacagggttgtctcgcagctt
ttggcagagctggatggtcttcattcgtctggagacgtcttcgtgattggagcaactaat
cgtccagatctgctggaccaatcactgctcaggcccggcagatttgataagctggtgtat
gttggtataaatgaagaccgagagtcgcagctgcaggttctcaaggcgatcttacgcaag
tttaaggtggatgcgagtgtgtgtttgtctgatattgtggagtcctgtccacctcggctg
accggagcggatctgtactccctctgctcagacgccatgatgtgcgcagtcaagaggaag
atctcgcgcattactgaaggtgttgattcggagctcagctctctgactctgtgttccgaa
gacttcagtgaggctctctcgggcctgcagccgtccgtctctgagcagcagatcagcaga
tatcaactcctccagcagaagctcagcagcagatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (31)   
   Pfam (31)   
All databases (79)   

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