KEGG   Danio rerio (zebrafish): 796380
Entry
796380            CDS       T01004                                 
Symbol
eif3ba
Name
(RefSeq) eukaryotic translation initiation factor 3, subunit Ba
  KO
K03253  translation initiation factor 3 subunit B
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dre03019]
    796380 (eif3ba)
   03012 Translation factors [BR:dre03012]
    796380 (eif3ba)
Messenger RNA biogenesis [BR:dre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     796380 (eif3ba)
Translation factors [BR:dre03012]
 Eukaryotic type
  Initiation factors
   eIF-3
    796380 (eif3ba)
SSDB
Motif
Pfam: eIF2A RRM_1 Nup35_RRM Methyltr_RsmF_N DUF5416
Other DBs
NCBI-GeneID: 796380
NCBI-ProteinID: NP_001277022
ZFIN: ZDB-GENE-030131-2748
Ensembl: ENSDARG00000059654
UniProt: X1WET9
Position
3:41714966..41724932
AA seq 681 aa
MRDTENMEAEMEYDDEEEPSFSDPEDFDDDISDQELLGDVLRDKPQEADGIDSVIVVDNV
PQVGPDRLEKLKNVIHKIFSKFGKITNEFYPDADGKTKGYIFLEYSAPSHAHEAVKNADG
YKLDKQHTFRVNLFTDFDKYMSICDEWEAPEKQPFKDFGNLRHWMEDPDCRDQYSVIYDS
GERTGIFANDVKEPIEVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFS
HQGVQLIDFSPCERYVVTFSPLMDTKDDPQAIIIWDVLTGQKKRGFHCESSAHWPIFKWS
PDGKFFARMTQDMLSIYETPSMGLLEKKSLKINGIKDFSWSPGDNIIAFWVPEDKDIPAR
VTLMQFPSRNEMRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREK
QVPVDVVEMKDSIIAFAWEPNGSKFAVLHGESPRINSSFYHVKSNGKIDLIKMFDKQQAN
SIFWSPQGQFLVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRFVVTSVSW
WSHKVDNAFWLWTFQGRLLQKNNKERFCQLLWRPRPPSLLTQEQIKLIKKDLKKYSKIFE
QKDRLSQSKASKELVDKRRTMMEEYRKHRKRAMDMYQEQRPLRLELRGGVDTDELDSNVD
DWEEETIEFFINEEIIPIGDL
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcgagatacggagaacatggaggccgaaatggagtatgacgatgaagaagagccttcg
ttcagtgatccggaggacttcgacgatgacatcagtgatcaggagctgctgggggatgtt
ctcagggacaaaccgcaggaggctgacggcatcgactcggtcatcgtggttgataatgtg
cctcaggtcggacctgatcgcctggaaaagctcaagaacgtcattcacaagatcttctca
aagtttggcaaaatcaccaatgagttctaccctgacgcagatggaaagaccaaggggtac
attttcctagagtattctgcaccaagtcacgctcatgaagcggtcaaaaacgctgatggc
tacaagctggacaagcagcacaccttccgtgtcaatctgttcactgactttgacaagtac
atgtcaatctgtgatgagtgggaagctcctgaaaagcagccatttaaagattttggtaat
ctgcgccactggatggaggatcctgactgtcgtgatcagtacagcgttatctatgactct
ggtgaaagaacgggcatattcgccaatgatgtcaaggagcctattgaagtggaggagaga
gcgcgctggactgagacatacgtgcgctggtctccgaaaggcacatatctggctacattc
catcagagaggcatcgctctgtggggtggggagaagttcaagcagatccagaggttcagt
catcagggggttcagctcattgacttctctccctgtgagaggtatgttgttacattcagc
cctcttatggacactaaagacgacccacaggccatcattatctgggatgttctcacagga
cagaagaaaagaggctttcactgtgaaagctctgcccactggccaattttcaagtggagt
ccagatgggaaattcttcgcccgaatgacccaagacatgctgagcatctacgagactcca
tcgatgggtcttttggagaagaagagtttgaagataaacggaattaaggatttctcctgg
tcacctggtgataacatcattgcattctgggtccctgaggataaggacatcccagcaaga
gtaacgctcatgcagtttccatctaggaatgagatgagagtccgcaacctgtttaatgtt
gtagactgcaaacttcactggcagaagaatggagactatctctgtgtgaaggtggatcga
acacccaaaggaacacagggtgttgtcaccaactttgagatcttcaggatgagagagaag
caggtacctgttgatgtggtggagatgaaagacagcattattgcctttgcttgggagcca
aatggaagcaaatttgctgtgctacatggagaatctcctagaatcaattcatcattctac
catgtgaagagcaatggaaaaatcgacctaattaaaatgttcgacaagcaacaggcaaac
agcatcttttggagtccccaggggcagtttttggtcttggctggactgaggagcatgaat
ggagctcttgcttttgtggacacttcagactgcaccatgatgaacatcgccgagcattac
atggcttcagatgtggagtgggaccccactggacgattcgtcgtgacatctgtctcttgg
tggagtcacaaggtggacaatgccttctggctgtggacgttccagggtcgcctgctgcag
aagaacaacaaggagcgtttctgccagctgctgtggaggcctcgtccgccctctctcctg
actcaagagcagataaagctcattaagaaggacttgaagaaatactccaagatctttgag
cagaaagatcgtctcagccagtccaaggcttcaaaggaactggtggacaagagacgtacc
atgatggaggagtatcgcaagcaccgcaagagagccatggacatgtaccaggagcagaga
cctctccgcctcgaactcagaggaggcgtggacactgatgagctggacagcaatgtcgat
gactgggaggaagagaccattgagtttttcatcaatgaagaaattattcccatcggagat
ctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (55)   

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