KEGG   Danio rerio (zebrafish): 80955
Entry
80955             CDS       T01004                                 
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1
  KO
K04506  E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04115  p53 signaling pathway
dre04120  Ubiquitin mediated proteolysis
dre04137  Mitophagy - animal
dre04310  Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    80955 (siah1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    80955 (siah1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    80955 (siah1)
  09143 Cell growth and death
   04115 p53 signaling pathway
    80955 (siah1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    80955 (siah1)
Enzymes [BR:dre01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     80955 (siah1)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   SINA (Seven in absentia) proteins
    80955 (siah1)
SSDB
Motif
Pfam: Sina_TRAF Sina_ZnF Sina_RING Trm112p
Other DBs
NCBI-GeneID: 80955
NCBI-ProteinID: NP_955815
ZFIN: ZDB-GENE-010319-31
Ensembl: ENSDARG00000030871
UniProt: Q7ZVG6 A0A0H2UKD5
Position
18:18439332..18472258
AA seq 286 aa
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLLHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq 861 nt   +upstreamnt  +downstreamnt
atggacgaagaaatgagtcgccagactgccacagcgctgcccacaggaacctctaagtgt
cccccttctcagcgcgttccaactttgtcgggcaccacagcatccaacagtgacctcgcc
agcctgtttgagtgcccggtctgtttcgactatgtgttgccgcccatcctgcagtgccag
agcggccatttggtgtgtagcaactgccggcccaaactcacctgctgccccacctgcaga
ggcccgcttgggtcgatccgtaatttggcaatggagaaagtggccaactcagtgcttttc
ccctgcaagtacgcctcatcgggctgcgaagtcactctaccgcacacagacaaagctgaa
cacgaggagctttgtgaattccggccatactcttgcccctgtcctggcgcctcctgcaag
tggcagggatctctcgacgccgttatgccccacttgctgcaccagcacaagtccataacc
acactacaaggtgaggatatagtcttcctggccacagacatcaacttgcctggagcagtg
gactgggtcatgatgcaatcctgcttcggcttccattttatgcttgtgctggagaagcag
gagaaatacgacggccaccagcagttctttgccatcgtccaactgatcggcacacggaaa
caagcggaaaacttcgcctaccgactggagttgaacggccacaggcggcgactcacttgg
gaggcaacgccacgttctatccatgagggcatcgccaccgccatcatgaacagtgactgc
ttggtgtttgacacctctattgctcagctgtttgccgagaacggcaacctgggcattaac
gtcaccatatctatgtgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (112)   
   KEGG ORTHOLOGY (1)   
   RefGene (106)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (134)   

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