KEGG T01004: 81597

Danio rerio (zebrafish): 81597

Entry

81597             CDS       T01004

Symbol

gtf2ird1

Name

(RefSeq) general transcription factor II-I repeat domain-containing protein 1 isoform X1

K27274

general transcription factor II-I repeat domain-containing protein 1

Organism

dre Danio rerio (zebrafish)

Brite

KEGG Orthology (KO) [BR:dre00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dre03021]
    81597 (gtf2ird1)
Transcription machinery [BR:dre03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     81597 (gtf2ird1)

SSDB

Motif

Pfam:

GTF2I

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

ZFIN:

Ensembl:

UniProt:

Position

5:65351176..65407759

AA seq 974 aa
MAQIRKLGCDGMRTNSRPELKVPQVSARQEILTSLVSALDSVCSAMSKLNAEVACVTVHE
DSVIAVGTEKGRIFLNSRKEIQTDFHKFCKVSCLQALNSMNSHSKVPEVDCSRTGKDSSG
QQGRQRALTDTHSNIFVLRKMVEEVFSVLYSEAVGKSSLVPVPYDWILKDPSSVVVYGLP
DGVTLRKPSEYDTKTLMKILEQSNRIRFIVKRTPEEPSRDAKSCPEVNHHSSTSKSASNH
TSVKPSVQEVSASNSMLSSFLYGMPMSSQPHPDSKLDLKPTSLHSIGKERPGMWTPAEEK
AVQAKECADNGERIGLAADLTQSPPSIHVSKRLLFSIVHEKSEKWDSFIRETEDINTLRE
CVQILFNSRYAEALGLDHMVPVPYRKIACDPEAVEIIGIPDKIPFKRPCTYGVPKLKRIL
EERHAVRFVVRRMFDERIFTAAGKVAKEEGKQDGPASEDGFPEGLRIPSSSLELVSNTHS
SRSTSSCVSPLAECEAGPSGDCLPLKKIKTEPPDGEIIQVTVPESSASTEESSEPQAERV
TPDLCRPKEPVAEDLTPKSTPQGLKRAVEEDIGEMILQLRKQVESLFSCKYSEALGLPEP
AKVPYSKFQMYPDDLYVTGLPEGMTFRRPNCFGAAKLRKILSASSQITFVITRPELLTEP
VKNESVSKTTSESAETDSKDQSDDPGPASKRPGFSDSLEAKLSRIDLANTLREQVQDLFN
RKYGEALGIKYPVQVPYKRIKSNPGSVIIEGLPPGIPFRKPCTFGSQNLERILAVADKIS
FSITRPFQGLIPKPAPRRITILKKGYTPISEEDEVNRMGEKVILREQVKELFNKKYGEAL
GLDRSVIVPYKLIRANPGSLEVCGLPDDIPFRNPNTYDIVRLEKVLQAQDEITFNIKTPL
QPFTELCTQSCNKEGKEVSTNRRKRKRVLESSQTSMPTAGDSALSTNQIPVMQWPMYMVD
YSGVNVQVPGKVKY

NT seq 2925 nt +upstreamnt +downstreamnt
atggctcagatacggaagttgggctgtgatgggatgagaacaaactctcgaccagagctc
aaagttccccaagtctcagccagacaagagatcctcaccagccttgtgtctgctctggac
tcggtgtgctccgccatgtctaagctgaatgctgaggtggcctgtgtcactgtgcatgag
gacagcgtgatcgcagtgggaacagagaagggaagaatcttcctgaactccagaaaggaa
atacagactgactttcacaagttttgcaaagtgtcctgtctacaagcgctaaactccatg
aactcccacagcaaagttcctgaagtagactgcagcaggactggcaaagacagcagcggg
cagcagggcagacagagagccttaacagacactcattccaacatcttcgtcctgaggaag
atggtggaggaggtgttcagcgtgctttacagtgaggctgttgggaagagcagcctggtc
cctgtgccttatgactggattctcaaggatccaagttcagtagtagtgtacggcctgcct
gacggtgtgactttgagaaagccttcggaatacgacaccaagaccttaatgaagatctta
gagcagagcaaccgcatccgattcatagtcaaaagaacgccggaggaaccctcacgggat
gccaaatcctgtccggaagtcaaccatcactcttcgacctcaaagagcgctagcaaccac
acctcagtcaaaccctcagtgcaggaagtatccgccagcaactccatgctctccagcttc
ctgtacgggatgcccatgtcctcccagcctcacccggacagcaagctggacctcaagcca
acgtcactgcacagcatcggcaaagagcggccgggcatgtggacgcccgccgaggaaaaa
gccgttcaggccaaggaatgtgctgacaatggcgagcgaatagggctggcagcagatctt
acccagagccctcccagcatccatgtctccaagcgccttctgttctccatagtgcatgaa
aaatcagaaaaatgggattcgttcatcagggagacggaggatatcaatacccttcgagaa
tgtgttcagatcctgttcaacagcagatatgccgaggcattaggcctggatcacatggtt
cctgtgccataccgtaagatcgcttgtgatcctgaggccgtggagatcattgggattccc
gacaagattcccttcaagaggccatgcacttacggtgtgcctaaactcaagcgcatcctg
gaggaaaggcacgccgtccgcttcgttgtcagaagaatgtttgatgaacggatttttact
gctgctggtaaagtcgcaaaggaggagggcaaacaggatggacctgcctctgaggatggt
tttccagaaggcctcaggatcccgagctcttctttagagctggtcagcaacactcacagc
agcagatcaaccagctcctgtgtcagtcctttggccgagtgtgaagcagggccatctggg
gactgcctgcctttgaaaaagatcaaaacagaacccccagatggtgaaattatccaggtg
acggtgccagaatccagtgcttcaacagaggaatccagtgagcctcaggctgagcgagtg
acccctgacctctgtcgtcccaaggagcctgtcgcagaagatttaacaccgaaatctaca
ccgcaagggctcaaaagagctgttgaagaagacatcggagagatgatccttcagctgcga
aagcaagtcgagagcctgttcagctgcaagtacagtgaggctcttggtctgcctgagcca
gctaaggtgccgtactccaagtttcagatgtatccagatgacctgtacgtcacggggctg
cctgaaggcatgacttttcgaaggccaaactgttttggagcagctaaactcagaaaaatt
ctttctgccagcagtcagattacttttgttataacgaggccagaattgttgacggaaccg
gtcaaaaatgaaagtgtctctaagacgacctctgaatcagcagagactgactccaaagac
caatcagatgacccagggcctgcctccaaaagacctggattctcagacagtttagaggcc
aagctctcccgtatcgacttggcgaacacactacgagagcaagtccaagacctgttcaac
aggaaatacggcgaggcactgggcattaagtatcctgtgcaagtgccttacaagaggatc
aagagtaaccctggctcggtgattatcgagggcctgccccctggcatccctttccgaaaa
ccctgtaccttcggctcacagaatctagagaggatattagcggtggcagacaagatctct
ttcagcatcacaaggccttttcaagggcttattcccaagccagcaccgcgaaggataacc
atattgaagaaaggttacaccccaataagtgaagaagacgaggtcaatcgaatgggagag
aaagtgatattaagagaacaagttaaagagctcttcaataagaaatacggtgaagctttg
ggtctggatcggtcggtcattgttccatataaattaattcgagccaatccaggctcactg
gaagtgtgtggacttccagacgatattcccttcaggaatcctaatacttacgacattgtt
cggttggaaaaagtcctgcaagcccaagatgaaattactttcaatatcaaaaccccccta
cagccttttacagagttgtgtactcagtcttgtaataaagaaggtaaagaagtttcaacg
aatcgacgcaagcgcaaacgtgtacttgagtccagtcagacatccatgcccactgcagga
gactcggcgctgtcaaccaatcagatacctgtcatgcaatggcccatgtacatggtggac
tatagcggcgtgaatgttcaagttcctggcaaagtcaaatactaa

All links

Gene (18)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (11)   
   UniProt (2)   
   RefSeq(pep) (9)   
DNA sequence (18)   
   RefSeq(nuc) (16)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (48)   

Download RDF

DBGET integrated database retrieval system