KEGG   Desulforamulus reducens: Dred_3054
Entry
Dred_3054         CDS       T00494                                 
Name
(GenBank) Uncharacterized P-loop ATPase protein UPF0042
  KO
K06958  RNase adapter protein RapZ
Organism
drm  Desulforamulus reducens
Brite
KEGG Orthology (KO) [BR:drm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:drm03019]
    Dred_3054
Messenger RNA biogenesis [BR:drm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     Dred_3054
SSDB
Motif
Pfam: ATP_bind_2 AAA_18 AAA_33 Zeta_toxin SKI AAA_22 AAA_16 DUF2380
Other DBs
NCBI-ProteinID: ABO51556
UniProt: A4J903
Position
complement(3315946..3316842)
AA seq 298 aa
MSDSEGGVEVSSPRLLIVTGMSGAGKTQAVQSLEDLGYFCVDNLPPALIPKFAELVSQSN
GKVEKVALVVDIRGGAFFHQAIEVLHDLGEQGYRFEVLFLEASDETLVRRYKESRRRHPL
DNHGEVLKVIQEERELLREIRGRATKVIDTSNVSNNQLKEQIITQYGGDKENSNRLLITV
ISFGYKYGIPMDSDLVLDVRFLPNPYYIPELRCLTGNDEPVQQHVMSQDVTKEFMEKLID
FVQFLVPHYQREGKATLMIAIGCTGGMHRSVTLTNKLGEVLSEKGYRVNVRHRDIMRV
NT seq 897 nt   +upstreamnt  +downstreamnt
atgtctgactcagaggggggtgttgaagtgtccagtccacggctattaattgttaccggc
atgtccggagcgggtaaaacccaagctgtgcaaagtttggaggacctgggctacttctgt
gtggataatttacctccggccctgattcccaaatttgccgaactggtttcccagtccaat
ggcaaagtggagaaagttgccctggtggtggatattcgcggtggggcgttctttcaccag
gccatagaagtattgcatgacctcggtgaacagggataccggtttgaagtcttattctta
gaagcatcggatgaaacactggtacgtcgctataaagaatcccggcgccgccacccgctg
gataaccacggcgaggtattaaaggttatccaggaggagcgggaactgctgcgggaaatc
cggggcagagccaccaaagtcattgatacctccaacgtttccaacaaccagttaaaggaa
caaatcatcacccagtacggtggtgacaaggaaaactccaacaggctgctcattaccgtt
atttcctttggctacaaatacggtattcccatggattccgacttggtgctggatgtacgg
tttctgcccaatccctactatataccggaactgcgctgcctcacgggcaatgatgaaccc
gtgcagcagcatgtcatgtcccaggacgtaaccaaagaatttatggaaaaactaattgat
ttcgtccagtttctggtgccccactatcaaagggagggcaaggctacactgatgattgcc
attggctgtaccggtggtatgcatcggtccgtaaccctcaccaataagctgggtgaagta
ttaagtgaaaagggctaccgagttaatgtaaggcaccgagatatcatgcgagtttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system